LOCUS       XM_006257483             684 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus reproductive homeobox 9-like
            (LOC100364002), mRNA.
ACCESSION   XM_006257483
VERSION     XM_006257483.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257483.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257483.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..684
                     /gene="LOC100364002"
                     /note="reproductive homeobox 9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 72% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100364002"
                     /db_xref="RGD:2321855"
     CDS             1..684
                     /gene="LOC100364002"
                     /codon_start=1
                     /product="rhox homeobox family member 2"
                     /protein_id="XP_006257545.2"
                     /db_xref="GeneID:100364002"
                     /db_xref="RGD:2321855"
                     /translation="MDTPQDSCQSFQKSLSLGAEVDPEQQHGGTAVVSEAREVGDQSQ
                     RLVGGLVQGGLDQGQPAQGQLAGGNLPQEEPAELSLAQDATGVGEEGDEKEEEMEARY
                     AGDGAYGPEDNNVQQEGDQHPNDQEQPQQEAAIPEGSRGQQAGNNLAHPRYSRTRFTP
                     SQLRDLERLFQETRYPSLRTRKDIARWMGVEECDVQNWFRMRRSLFQRSRRVLLLCTL
                     QPFPQNNSS"
ORIGIN      
        1 atggacactc ctcaagacag ctgccaaagt ttccaaaagt ctctgagtct gggagctgag
       61 gtggacccgg agcaacagca tggtgggact gcagtggtct cagaggctag agaggtagga
      121 gaccaatcac agcgtttagt gggcgggctt gttcagggtg ggcttgatca gggccaaccc
      181 gcgcagggcc agttggctgg aggcaacctt cctcaagaag agcctgctga gctcagtctc
      241 gctcaggacg ccacaggagt aggagaggag ggagacgaga aggaagaaga aatggaagca
      301 agatatgctg gtgatggtgc ttacggcccc gaggacaaca acgtccagca agaaggtgac
      361 caacacccca atgatcaaga gcagcctcag caagaggcag ccattcctga gggcagcagg
      421 ggtcaacagg ctgggaacaa cttggctcac ccgcggtaca gtcgcacgag gttcaccccg
      481 tctcagctgc gtgatctgga gcgcctgttc caagagactc gctaccccag cttgcgaaca
      541 aggaaggaca tcgcacgatg gatgggagtg gaggaatgtg atgtgcagaa ttggttccgg
      601 atgagaagat ctcttttcca gagaagcagg agagtgctgc ttctctgcac tctgcaacca
      661 tttccccaga acaactcttc ctga
//
