LOCUS       XM_039089887            1142 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical LOC100363914
            (LOC100363914), mRNA.
ACCESSION   XM_039089887
VERSION     XM_039089887.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039089887.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1142
                     /gene="LOC100363914"
                     /note="hypothetical LOC100363914; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100363914"
                     /db_xref="RGD:2322042"
     CDS             135..728
                     /gene="LOC100363914"
                     /codon_start=1
                     /product="CD209 antigen-like protein A"
                     /protein_id="XP_038945815.1"
                     /db_xref="GeneID:100363914"
                     /db_xref="RGD:2322042"
                     /translation="MCLDRKPFITVLKLISIVLLAALIIAVIVKGTEFLTSQDYDQQK
                     ENIHQKLDQVKAGLKHLCRPCPWLLFQGDQSLFQRNCYFFSISKKNWMESVKACKYMG
                     AQLVVIKSNEEQSFLQGISKKKGNFWMGLSYNNKESKWQWVDGSPLQGRTYWSAGEPK
                     MRGNKDCAIRTDYGWNALPCSHESLWICMKPALPCPK"
ORIGIN      
        1 accacttctc ttttactctt cctggttgag tgtaggtttg aggagtacaa aaaggttttg
       61 gcaaagagaa actgtactcc ccaaattcta cacatttgtg gacagcagtg aagaagagca
      121 tttgcaacaa agaaatgtgt ctggaccgta agcctttcat cactgtgctg aagctcatct
      181 ccattgtgct cttggctgct ctcatcatag cagtcattgt caaaggcact gagtttctta
      241 catcccaaga ttatgatcag caaaaggaaa acattcacca gaaactggat caggtgaagg
      301 ctggactaaa acacctgtgc cgcccttgcc cctggctgct cttccaaggg gaccagagct
      361 tgttccaaag aaactgttat ttcttctcca tatctaaaaa gaattggatg gaatctgtca
      421 aggcctgcaa gtacatgggg gcacaactag tggtcataaa aagtaatgag gagcagagct
      481 tcctgcaggg gatttctaag aagaaaggca atttctggat gggtctgtca tacaataaca
      541 aggaaagcaa gtggcagtgg gtggatggct caccactgca agggaggacc tattggtctg
      601 caggagaacc caagatgaga ggaaataaag attgtgcaat acgtacagat tacggatgga
      661 atgccctccc atgttcccat gagtcactct ggatctgcat gaagcctgca ctgccctgcc
      721 ctaagtgaat actgttcccc tccatggtct ccatacaggg atcttcatca tctagttgaa
      781 ttttagttca ttttgttttt ctgtggcact tgggtctcaa aattccatct gagatctata
      841 tttccagaca ccttgtcttt acacactcgg tccactcctg tgtcctctcc tgggtcaata
      901 atttacattg ggtggggtca gggttttgcc atgttctgag ctttcttcca ggattgaatt
      961 ctgggttgct tatcactccc ctcacttgct gttctcactc ttcctcctga gtgtggaagg
     1021 aagagtgacc agccatcctc ctgcatctgt tgtcatgccg ttacttcctc cagctgttgc
     1081 tgtgcctaca gcaacaccaa gaactccatc tctttggtat catcagccaa aataaatggt
     1141 tt
//
