LOCUS       XM_039093860             380 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PCNA-associated factor-like
            (LOC100363428), mRNA.
ACCESSION   XM_039093860
VERSION     XM_039093860.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093860.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..380
                     /gene="LOC100363428"
                     /note="PCNA-associated factor-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins, and 38% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100363428"
                     /db_xref="RGD:2323017"
     CDS             1..342
                     /gene="LOC100363428"
                     /codon_start=1
                     /product="PCNA-associated factor-like"
                     /protein_id="XP_038949788.1"
                     /db_xref="GeneID:100363428"
                     /db_xref="RGD:2323017"
                     /translation="MVKVCVNRFGDIPGDYRKVVASQAPRKVLGFSTFVTNSSGSSRK
                     VENKNAGGNSVFARPTPKWQKCIREFFRLSPKDSVKEKQILEEAGSSGLGKSRRKPCP
                     WQPDHRDDENE"
ORIGIN      
        1 atggtgaaag tctgtgtgaa cagatttggc gacatcccag gagactacag aaaagtggtg
       61 gcttctcaag cccctaggaa ggtgcttggc ttctccacct ttgtcaccaa ttcttcaggt
      121 tcgtctagaa aagttgaaaa taagaatgct ggagggaact cagtctttgc tcgcccaact
      181 cccaagtggc aaaaatgcat cagggaattc ttcaggctgt cccctaaaga ttctgtaaaa
      241 gagaagcaga ttcttgaaga agcaggaagc agtggcttag gaaaatcaag gagaaaacca
      301 tgtccttggc aacctgatca cagagatgat gaaaatgaat agaacttact catccgaata
      361 atgtcttcag tttacttaca
//
