LOCUS       XM_039094064             552 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ubiquitin-conjugating enzyme E2G 1
            (UBC7 homolog, C. elegans)-like (LOC100363427), mRNA.
ACCESSION   XM_039094064
VERSION     XM_039094064.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094064.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..552
                     /gene="LOC100363427"
                     /note="ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog,
                     C. elegans)-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins, and 84%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100363427"
                     /db_xref="RGD:2323018"
     CDS             1..552
                     /gene="LOC100363427"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 G1-like"
                     /protein_id="XP_038949992.1"
                     /db_xref="GeneID:100363427"
                     /db_xref="RGD:2323018"
                     /translation="MSSWLQPWLLVGRETELQLAPLLRRQLAELNKNPEEGFSADLID
                     DNDLYGWEVLVICPPDTLYEGGVFKAHLTFPKDYLLWPPKMKFITEVWHPDVDKNGDV
                     CISILLEPGEDKYDYEKPEEHWLPIHPVEAIMIRVISMLADPNGDSPAHVDAANEWRE
                     DRNGEFPRQVARCVRKSQDTAFE"
ORIGIN      
        1 atgagctcct ggctgcagcc ctggctcttg gtggggaggg agacagagct gcagttggca
       61 ccgctactga gaagacagct ggcagaactc aacaaaaatc cagaggaagg cttctcagca
      121 gatttaatag acgacaatga tctctatggt tgggaagtcc ttgttatttg tcctccagat
      181 acactttatg aaggtggtgt ttttaaggct catctcactt tcccaaaaga ctatctcctc
      241 tggcctccta aaatgaaatt cattacagag gtttggcacc cagatgttga taaaaatggt
      301 gatgtttgca tttctattct tctcgagcct ggggaggata aatatgatta tgagaagcca
      361 gaggaacact ggctgcctat ccatcctgta gaagccatca tgattcgtgt catttctatg
      421 ctggcagatc ctaatggaga ctcacctgca catgtagatg ctgcgaacga atggagggaa
      481 gacagaaatg gagaatttcc aaggcaagtc gcccgctgtg taagaaaaag ccaagacact
      541 gcttttgagt ga
//
