LOCUS       XM_039103896            1471 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC100363314
            (LOC100363314), mRNA.
ACCESSION   XM_039103896
VERSION     XM_039103896.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103896.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1471
                     /gene="LOC100363314"
                     /note="hypothetical protein LOC100363314; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, and 67% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100363314"
                     /db_xref="RGD:2323229"
     CDS             1..1221
                     /gene="LOC100363314"
                     /codon_start=1
                     /product="uncharacterized protein LOC100363314"
                     /protein_id="XP_038959824.1"
                     /db_xref="GeneID:100363314"
                     /db_xref="RGD:2323229"
                     /translation="MAVGSGDASWSGVGTVPEAQGARERKSGRGGPRTASAASQRPAK
                     TSARLRLPQPQPRSGPRPTTTPRVASPSGALPPLPPAPTRPALTQGRRSGPGLRVTYV
                     DVLRHRGGRGRTRSANPPQRLATPLRPCWEEGAGGGLALWGGGGSPRGDSLHFRPRTP
                     RKLARQPEKLIFRGPAQPRPLFGAEVGPSPHLAGFGSTCLSFHNLPSHGAGAPVPRQL
                     LAIHFHLRGPDARFARVRPTHLRPGLGGRGGEHARALGIRLPKVRPTVAARVYGFRDP
                     VCLERSSCDSSFAALHAPVPKAAASQLHVAGSLTHSRKARLRPETAACCCGGVRGETQ
                     HYISPCPRNHFLGKQHLGIGETDVANASERYLSLYYKLTLLYLAWYIGARALQSPILI
                     FTNGFYIGLPLGRH"
ORIGIN      
        1 atggccgtcg ggtctggaga cgcgagctgg agcggggtgg gcacagtgcc ggaggctcag
       61 ggcgcccggg agcgcaagtc cggccgggga ggaccccgaa cagcctcggc ggcctcccaa
      121 cggcccgcca agacttccgc ccggctcagg ctgccgcagc cccagccccg atccggcccg
      181 cggcccacaa cgactccccg ggtcgcctct ccctccggcg ccctccctcc tctccccccc
      241 gccccgaccc ggccggcact cactcaggga aggaggagcg gcccgggcct gcgcgtcact
      301 tacgtcgacg tgctgcgtca ccgcggcgga cgcggacgca cccggagcgc caatcccccg
      361 caacgcctgg ccacgcccct gcggccctgt tgggaggagg gagctggggg ggggttggcc
      421 ttgtggggag gaggagggag cccccgggga gattcgctgc acttccgacc gcgaactcct
      481 agaaaactgg ctcggcagcc ggagaagctt atattccgcg gccccgccca gccccgcccc
      541 ctttttggag ccgaggtggg cccttctcct cacctagctg gcttcggctc cacgtgcctc
      601 tctttccaca atctcccctc ccatggcgca ggtgctccgg tacccaggca gctcctcgcc
      661 atccattttc acctccgcgg cccggacgct cgcttcgcaa gggtccggcc gacgcacttg
      721 cgccctgggc tcggcggccg cgggggcgag cacgctcggg cgctggggat ccggctcccc
      781 aaggtccgcc ctacggtggc agcacgtgtc tacggattca gagacccggt ttgcctggag
      841 agatccagtt gtgattcctc cttcgcagct ctccacgcac cagtccctaa agcggctgcc
      901 agtcagttgc acgtggccgg ctcactcacc cattcaagaa aggctcggct gaggcctgag
      961 actgctgcct gctgctgtgg gggagtgagg ggagagacac aacactacat atctccttgc
     1021 cccaggaacc attttctagg aaaacagcat ctgggaattg gtgaaactga tgtggcaaat
     1081 gccagtgaac gttatctttc tctttattat aaactgactc ttctatacct tgcttggtat
     1141 attggagcca gagctttgca gagccccatt cttattttta ccaatggttt ttatattggg
     1201 ctcccccttg gcagacatta gagaggactt tccaagctgc aacagaatgc acagacttac
     1261 tccttcctgt tggtgcatcc tagaggaaca ttcttacctt gggaaggttt atctatcagt
     1321 cagttcttct tcattataag acaccagaag ccggatgctc gcagccaacc attgaactga
     1381 gaatggggtc cctaatggag gagttagaga aaggattgca gtagctgaag gggtttgcaa
     1441 ccccataaga agaacaatat caaccaacca g
//
