LOCUS       XM_039103593             467 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus thioredoxin-like 4 (LOC100363110),
            mRNA.
ACCESSION   XM_039103593
VERSION     XM_039103593.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103593.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..467
                     /gene="LOC100363110"
                     /note="thioredoxin-like 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins, and 39% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100363110"
                     /db_xref="RGD:2324778"
     CDS             33..467
                     /gene="LOC100363110"
                     /codon_start=1
                     /product="thioredoxin-like protein 4A"
                     /protein_id="XP_038959521.1"
                     /db_xref="GeneID:100363110"
                     /db_xref="RGD:2324778"
                     /translation="MYYILPHLHNGWQVDQAILSEEDCVVVIHFRHDWGPTCMKMDEV
                     LYIIAETKWKIRCFVNNYMVDFGEVPDFNKLAQLYDTCSTMFFFRSKYTMVDLGTGNN
                     KINWTLEDKQNMDDLIETIYHDACKDQSLVASRKDYSTKYRY"
ORIGIN      
        1 tcgtggcttc tcgctgcgca agcgcattca agatgtacta tatccttccg catctacaca
       61 atggctggca ggtagaccag gccatccttt cagaggagga ctgcgtggtc gtcattcact
      121 tcagacacga ctggggcccc acttgcatga agatggacga agttctgtac atcatcgccg
      181 aaacgaaatg gaagatacgt tgttttgtga acaattatat ggtcgatttt ggagaagtcc
      241 ctgattttaa taaattagct cagttgtatg acacatgctc cactatgttt ttcttcagaa
      301 gcaaatatac catggttgat ttgggcactg gaaacaacaa aatcaactgg accttggaag
      361 acaagcaaaa catggatgac ctcatagaga ccatatacca tgatgcctgc aaagaccaga
      421 gtctggtggc atctcgcaag gactattcta caaagtacag atattaa
//
