LOCUS       XM_039084329            2285 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein S27-like
            (LOC100362987), mRNA.
ACCESSION   XM_039084329
VERSION     XM_039084329.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084329.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2285
                     /gene="LOC100362987"
                     /note="ribosomal protein S27-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100362987"
                     /db_xref="RGD:2323707"
     CDS             240..494
                     /gene="LOC100362987"
                     /codon_start=1
                     /product="40S ribosomal protein S27-like"
                     /protein_id="XP_038940257.1"
                     /db_xref="GeneID:100362987"
                     /db_xref="RGD:2323707"
                     /translation="MPLAKDLLHPSPEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKIT
                     TVFSHTQTVVLCVGCSTVLRQPTGGKARLTEGCSFRRKQH"
ORIGIN      
        1 atttcataca aaggagctgt tcactcacac attagctctt ctgctgtcag caccatctag
       61 taggttggac agaagctata aacctgaagc acagtgcact ttagatccag cctttgactc
      121 atagtttgct ggcccctatt gtaaatgttc tggaggattc tacagttgta cagatagcag
      181 cacaggttta tataaaacta gatgttcctt tccggcagtg atgacctccc tacgagaaca
      241 tgcctcttgc aaaggatctt cttcatccct ctccagaaga ggagaagaag aaacacaaga
      301 aaaagcgcct ggtgcagagc cccaattcct actttatgga tgtgaaatgc ccaggatgct
      361 ataaaatcac cacggtcttt agccatacac aaacggtagt cttgtgtgtt ggctgctcca
      421 ctgtcctccg tcagcctaca ggtggaaaag caaggctgac agaaggatgc tccttcagga
      481 ggaagcagca ctgaaagccc ctgattcaag atgagtggga accaggggtt ggggatttag
      541 ctcagtggta gagcgcttgc ctagcaagcg caaggccttg ggttcggtcc ccagctccga
      601 caaaaaagaa aaaagaaaaa aaaaaagatg agtgggaacc ttcccaataa acacattttg
      661 gataaaacaa acaaaaacca aacaaaacta gatgttttgc aagcactgat ttgtgagacc
      721 agaattcctg gcacccagaa gtgggaagtt gcaccaggtt cttctatggc tcctcatgtg
      781 cctgcattct cttctgtact gggcagtgca agttggagag ggtggagttg ggagggtgag
      841 caggggcatg tcccccacct acagcataag gttgctagat ggttcagaga taagctttgc
      901 tcagaatgag ctctggggcg tcatctgcgg tctcaagcca aggatgggac tgctttaact
      961 tttttttttt aaacatttat gtgggattgg agagttcaga gcaccagctg ctcttgtaaa
     1021 agacttgggt ttgattctca gcacccatgt gttgactcac ataggtaact ctagtttcag
     1081 agcatttgat gcccccttct gacctctgca ggtactgcac acaagacctt tacacatcta
     1141 aaaattcttc aaaagtgtgt aactttttgg aagttagttt tcatggtgtg gatggatggg
     1201 ctgtggggat ggaacatatg ttttcatctg gctaaaagtg cctctgtgta catcatggag
     1261 cctctcacca attactgcct tactttttta aaaaccctgc atagctgagt gaatgggata
     1321 tgcctgttag cctgtattcg gtggctgagg taggagatct tgacatcaag gttagcctga
     1381 actatacagt agtggacatg ggggtacatg tctctagaga attctagtac ttgagaggca
     1441 gaagcaggag gatctctctg agttcatgaa gctagctggt ctacaaagtg agttccagga
     1501 tagccaggtc tgttaagaac cttgtctcga aaaaccaaaa ccacccaaac acaatggggt
     1561 atagttatgt cctcagcaca caatatccca ggttgacctg gacatcaggg atttgcctgc
     1621 ctctacctcc ccaggggtat acaactaagg gcatgggcca ccatatcaaa gatgttagaa
     1681 aatttatgat tagaaaccta atcttagaaa atcatgtgag tgggtgcctc caaaggtcgc
     1741 aggtgttgga tcccctggag ttggagctgg aggtggtttt atgccacttg atatacgtgt
     1801 tgggatttga actcaggccc tctggaagag caatatgcaa tcttaaccat taagtgtcta
     1861 ccactgtgta gacagatgag tcctgagagc agagtaaatg taataaaata cacgcctaaa
     1921 ttaaaaaacc tacctgttct tcacacagct cgcctgctct tgaaaataca gtggcagtga
     1981 ccacacaaga ctccgtccct gtccaggcat ggagggctaa caggactgat agacattgga
     2041 gttcatacgc gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgcgc
     2101 gcgcacgtgc gccgcccata gaggactctc cctcaacccc aaacacaggt catctgtctc
     2161 tcctgcctat tcattttttt tttttttttt atgatgggaa gctctatttt tttttaaaga
     2221 cttattttat ttatgagtac actgctggtc tcttctaaga agagggcatg ggatcccatt
     2281 ctctg
//
