LOCUS       XM_039099369            1090 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus frataxin-like (LOC100362810), mRNA.
ACCESSION   XM_039099369
VERSION     XM_039099369.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1090
                     /gene="LOC100362810"
                     /note="frataxin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein, and 80%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100362810"
                     /db_xref="RGD:2323968"
     CDS             1..867
                     /gene="LOC100362810"
                     /codon_start=1
                     /product="zinc finger protein 120-like"
                     /protein_id="XP_038955297.1"
                     /db_xref="GeneID:100362810"
                     /db_xref="RGD:2323968"
                     /translation="MGKSVVTYDDVRVNFTLDEWTLLDPSEKSLYRDVMLETYRNLTA
                     IGYNWEDDNIKEHFQSSRRHGRHKRIHTGEKPYECYQCGKAFAYAKSLQVHQRSHTGE
                     KPYKCYQCGKAFTYRSGFQVHKRSHTGEKPYVCKQCGKAFACSSHFRRHKRIHTGEKP
                     YNCNQCGKAFACSSHFQRHKRIHTGEKPYNCNQCGKAFACSSHFQRHKRIHTGEKPYN
                     CNQCGKAFAYKSNLQIHRVTHTGEKPYGYNQCCKDFVSQSHLLKHKKTHTGEKPYKCN
                     QCGRAFPYYNGL"
ORIGIN      
        1 atgggaaaga gtgtggtgac ctatgatgat gtgcgtgtga acttcaccct ggacgaatgg
       61 actttactgg atccttcaga gaagagtctt tacagagatg tgatgctgga gacctacagg
      121 aatctcactg ctataggcta caactgggaa gatgacaata tcaaagaaca ttttcaaagt
      181 tctagaaggc atggaaggca taaaagaatt catactggag agaaacccta tgaatgttac
      241 caatgtggta aagcctttgc atatgccaag agtctccaag tacatcaaag atcacacact
      301 ggagagaaac cctataaatg ttaccaatgt ggtaaagcct ttacatatcg cagtggtttc
      361 caagtacata aaagatcaca cactggagag aaaccctatg tatgtaagca atgcggtaaa
      421 gcctttgcat gtagcagtca ttttcgaagg cataaaagaa ttcatactgg agagaaacct
      481 tataattgta accaatgtgg taaagccttt gcatgtagca gtcattttca aaggcataaa
      541 agaattcata ctggagagaa accttataat tgtaaccagt gtggtaaagc ctttgcatgt
      601 agcagtcatt ttcaaaggca taaaagaatt catactggag agaaacctta taattgtaac
      661 cagtgtggta aagcctttgc atataaaagt aatctccaaa ttcatagagt aacacacact
      721 ggagagaaac cctatggata taatcaatgc tgtaaagact ttgtgagtca gagtcatctc
      781 ctaaaacata aaaaaacaca tactggagag aaaccgtaca aatgtaacca atgtggtaga
      841 gcctttccat attacaatgg tctctgagta cataaaaaaa gcataccctg gagggaaacc
      901 ctctgaatgt aattaatgta gtaaagcctt tgtacatcat aatagtctcc aaatacataa
      961 aagaacacat agtggaaaga aaccctatga agtatccaat gtggtgaaac ctttgcatat
     1021 cacagtattc tccaaaaacg aaaaagaaga cacagaagac aacctgtatg aatgtaatca
     1081 atgcaataaa
//
