LOCUS       XM_039099385             838 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus proteasome activator complex subunit
            2-like (LOC100362709), mRNA.
ACCESSION   XM_039099385
VERSION     XM_039099385.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099385.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..838
                     /gene="LOC100362709"
                     /note="proteasome activator complex subunit 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 ESTs, 73 long SRA reads, 14 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100362709"
                     /db_xref="RGD:2324149"
     CDS             16..798
                     /gene="LOC100362709"
                     /codon_start=1
                     /product="proteasome activator complex subunit 2-like"
                     /protein_id="XP_038955313.1"
                     /db_xref="GeneID:100362709"
                     /db_xref="RGD:2324149"
                     /translation="MGRVKAKAGAAIPDSRAGKWGSMAKPCGVRLSGEARKQVDAFRQ
                     NLFQEAEDFLCTFLPRKIISLSQLLQEDSLNVADLSSLRAPLDIPIPDPPPKDDEMET
                     EQEKKEVPKCGFLPGNEKLLALLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFG
                     VAIQEKVLERVNAVKTKVEAFQTAISKYFSERGDAVAKASKDTHVMDYRALVHERDEA
                     AYGALRAMVLDLRAFYAELHHIISSNLEKIVNPKGEEKPSMY"
ORIGIN      
        1 ttaagaaaat cagaaatggg gagagtgaaa gcgaaagctg gggctgctat cccagattcg
       61 agagctggca agtggggaag catggccaag ccttgtgggg ttcgcttgag tggagaagcc
      121 cgtaaacagg tggatgcctt cagacaaaat cttttccagg aggctgagga cttcctttgc
      181 actttcttgc cacggaaaat catatccctg agtcagctct tgcaagagga ttccctcaat
      241 gtggctgacc tctcctccct ccgggctcct ctggacatcc ctatcccaga tcccccaccc
      301 aaggatgatg agatggaaac cgagcaggag aagaaagaag tccctaagtg tggcttcctc
      361 cctgggaatg agaagcttct ggccctgctt gccttggtta agccagaagt ctggactctc
      421 aaagagaagt gcattctggt aatcacatgg atccagcacc tgatccccaa gattgaggac
      481 ggaaatgatt ttggggtggc aattcaggag aaggtgctgg agagagtgaa tgctgtcaag
      541 accaaagtgg aagccttcca gacagccatc tccaagtatt tctcagagcg tggggatgct
      601 gtagccaagg cctccaagga cacccatgta atggattacc gggccttggt gcacgagcga
      661 gatgaagcag cctatggggc gcttagggcc atggtgctag acctgagagc cttctatgct
      721 gagcttcatc acatcatcag cagcaaccta gagaaaattg tcaacccaaa gggtgaagaa
      781 aagccatcta tgtactgagc aaaggattag aaggaaaata aatgatttat actttatg
//
