LOCUS       XM_039087201            1485 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L13-like
            (LOC100362400), mRNA.
ACCESSION   XM_039087201
VERSION     XM_039087201.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087201.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1485
                     /gene="LOC100362400"
                     /note="60S ribosomal protein L13-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 ESTs, 80 long SRA reads, 21 Proteins, and 93%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100362400"
                     /db_xref="RGD:2318188"
     CDS             778..1335
                     /gene="LOC100362400"
                     /codon_start=1
                     /product="60S ribosomal protein L13-like"
                     /protein_id="XP_038943129.1"
                     /db_xref="GeneID:100362400"
                     /db_xref="RGD:2318188"
                     /translation="MAPSRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKAR
                     RIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKMARTIGISVDPRR
                     RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNV
                     YKKEKARAITEEEKNFKAFASLRMA"
ORIGIN      
        1 ggatttagct cagtggtaga gcgcttgcct agcaagcgca aggccctggg ttcggtccca
       61 gctccgaaaa aaagaaaaaa gaagaaaaat aaataaataa ataaataaat aaataaataa
      121 ataaataaaa gaaagacagg gtttttctat gtagcctggc tatcctggaa ctcactctgt
      181 agcctaggct ggcttcaaac cgtctctgcc cccaaagtgc ttagactata ggcatgttcc
      241 atcagcaccc agctaaataa gaactttcta aagaagcatt ggtgttacag ctccgtggta
      301 gagtgtcaac ttaggatgct gtttcagtct ccactaccaa taagtgaaaa aataaatatt
      361 gaattgtgtt ctttaaaaag atcagttttg tgctgtgcaa actaaatagt atggttggta
      421 ccacagttag tgctggtgac ctgttagccc ctcaccagcc tggagactta taatttagaa
      481 aataaattta gaaaaaagta aaagccgggg gctggagaga tggctcggca gtgaagaatg
      541 atggttatta ctgcagaaga tctacctggg ttcgattaac agaactcaga accatcacac
      601 caaggtagca ggggatctga ctccctcctc tggccttcac aggcaccaga catgcacatg
      661 gtacactgac atacataggt gtaagaaagc aagacaacca catacataaa atgaaaataa
      721 aaagtaaaaa ccatcttttc ctttccgctc ggccgttctc ctgtacagga ggcagccatg
      781 gcgcccagcc ggaatggcat gatcctgaag ccccactttc acaaggactg gcagcagcga
      841 gtggacacgt ggttcaacca gccggcccgc aagatccgca gacgcaaggc ccggcaggcg
      901 aaagcgcgcc gcatcgcccc tcgccccgcg tccggtccca tcaggcccat cgtgaggtgc
      961 cctacagtta gataccacac caaggtccgg gctggcaggg gcttcagcct ggaggagctc
     1021 agggtggctg gtatccacaa gaaaatggca cgcaccatcg gcatctccgt ggacccaagg
     1081 aggcgaaaca aatccacgga gtcactgcag gccaacgtgc agcgcctgaa ggagtaccgc
     1141 tccaagctca tacttttccc caggaagcct tctgctccga agaagggaga cagttctgct
     1201 gaagaactta aattggccac gcagctaaca ggacctgtga tgcccatccg gaatgtgtac
     1261 aaaaaggaga aggccagagc catcacggaa gaggagaaga actttaaggc tttcgccagc
     1321 cttcgcatgg cctgagccaa tgcccggctc ttcggcatcc gagcaaagag ggcgaaagaa
     1381 gccgcagagc aagacgttga gaagaagaag taatgcgcgg ctggagagtt gtaataaatt
     1441 ttccataaag caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//
