LOCUS       XM_039111101             893 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC100362345
            (LOC100362345), mRNA.
ACCESSION   XM_039111101
VERSION     XM_039111101.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111101.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..893
                     /gene="LOC100362345"
                     /note="hypothetical protein LOC100362345; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100362345"
                     /db_xref="RGD:2318341"
     CDS             62..529
                     /gene="LOC100362345"
                     /codon_start=1
                     /product="uncharacterized protein C9orf85 homolog"
                     /protein_id="XP_038967029.1"
                     /db_xref="GeneID:100362345"
                     /db_xref="RGD:2318341"
                     /translation="MSSQKGNVTQSRPQKHQNTFTFKNDKFDKSVQTKKINAKLHDGV
                     CQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACKLEVCAKCGKE
                     EEIVIPFNKEPEPSENTESEGSNHRRSCKRKEDSDEDLDAESDSEGEDEDTQA"
ORIGIN      
        1 aataattaaa aagaactgta acttaagggc tgcaccaact tatggtgctt gtgttttggt
       61 gatgagttcc cagaaaggca acgtgactca gtcccggcct cagaagcacc agaatacatt
      121 caccttcaaa aatgacaagt ttgataagag tgttcagacc aagaaaatta atgcaaaact
      181 tcatgatgga gtatgtcagc gttgcaaaga agttcttgaa tggcgtgtaa aatacagcaa
      241 atacaaacca ctgtcaaagc ctaagaaatg tgttaaatgt ttacagaaga cagtaaagga
      301 ctcttaccac ataatgtgta gaccatgtgc ctgcaaactt gaagtttgtg caaaatgtgg
      361 aaaggaagaa gaaattgtta ttccgtttaa taaagaacca gaaccttcag aaaatactga
      421 aagtgaaggt tccaaccata gaagaagctg caaacggaag gaagacagtg atgaggactt
      481 agatgctgag tctgactcag agggcgagga cgaggacact caggcctgac cgcagctcag
      541 gtgcagaggg cgtcggcaaa ggctgttcca gtaggcagaa ctggctcagg agcaacgtca
      601 gtcacttaca acatttgagt atcaggtttt cacagtaaca caagctgcat atgcagaata
      661 tgtgtgggca caccatggca tgtcgtataa aacctataga aattgtttag aaaaacatat
      721 tacctaatgt gttaagaatt ggtggttgta tcagaactct ctcatggaaa actaagatga
      781 ctagctcaga ggacacttct ggagcctgac ctcggtgtat gacttcttta gcaaaagtcc
      841 ccttaaatct taccaagcaa accgttacac acacacacac acacacacac aca
//
