LOCUS       XM_039108939            1796 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mKIAA1238 protein-like (LOC100362344),
            mRNA.
ACCESSION   XM_039108939
VERSION     XM_039108939.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108939.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1796
                     /gene="LOC100362344"
                     /note="mKIAA1238 protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 8 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100362344"
                     /db_xref="RGD:2318342"
     CDS             16..1179
                     /gene="LOC100362344"
                     /codon_start=1
                     /product="beta-citrylglutamate synthase B-like"
                     /protein_id="XP_038964867.1"
                     /db_xref="GeneID:100362344"
                     /db_xref="RGD:2318342"
                     /translation="MCSSVTGKLWFLTDRRIQEDYPQKEILRALKAKCCEEELDFRAV
                     VMDEVVLTVEQGNLGLRINGELISAYPQVVVVRVPTPWVQSDSDITVLRHLEKMGCRL
                     MNRPQAILNCVDKFWTFQELAGHGVPLPDTFSYGGHENFSKMIDEAEVLEFPMVVKNT
                     RGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVGGRVVGTML
                     RCSTDGRMQSNCSLGGVGMMCSLSEQGKQLDIQVSNILGMDVCGIDLLMKDDGSFCVC
                     EANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSEPELG
                     PPASAAVDNMSASSSSVDSDPESTTERELLTKLPGGLFNMNQLLANEIKLLVE"
ORIGIN      
        1 aacaagcaga ccgagatgtg tagctctgtg actggtaagc tgtggttctt gacagatcgt
       61 cgcatccaag aagactaccc acagaaagag atcctaagag ctctgaaggc caaatgctgt
      121 gaagaggaat tggactttag ggctgtagtg atggacgagg tggtgctgac agtcgagcaa
      181 ggaaatctgg gtctgcggat caatggagag ctgatctctg cctacccaca ggtggtggta
      241 gtgagagttc caaccccatg ggtgcagagc gacagtgata tcactgtttt gcgccaccta
      301 gagaaaatgg ggtgccggct gatgaaccgg cctcaagcca tcctgaactg tgttgataaa
      361 ttctggacgt ttcaagagct ggctgggcac ggtgtgcctc taccagatac tttttcttac
      421 ggtggccacg aaaacttttc taaaatgatt gatgaagcgg aagtgctgga gttcccaatg
      481 gtggtgaaga atacacgggg tcatagaggc aaagctgttt tcttggcacg agataaacac
      541 catttagctg atctaagcca tcttattcgg cacgaagctc catatttgtt ccagaaatat
      601 atcaaagagt ctcatggaag ggatgtgaga gtcattgttg tgggaggccg tgtagttggc
      661 accatgctac gctgttcgac agatggaagg atgcaaagca actgttccct aggtggtgtg
      721 gggatgatgt gctcattgag tgaacaaggg aagcagctag atatccaggt gtctaatatc
      781 ctggggatgg atgtgtgtgg cattgacctg ttgatgaaag atgacggctc cttctgtgtc
      841 tgcgaggcca atgcaaatgt aggtttcatc gcctttgata aggcttgtaa tctagatgta
      901 gctggtatca tagcagacta tgctgcctcc cttctgcccg ctgggcggct cacccggcgc
      961 atgtccctgc tctctgtggt gtccactgcc agtgagacca gtgagccgga gctcggtccc
     1021 cctgccagcg ctgctgtcga caacatgagc gccagttcca gctctgttga tagcgaccct
     1081 gaaagcacca ccgagcgaga gctgctcacc aagctcccag gggggctgtt caacatgaac
     1141 cagctgctag ccaatgaaat caaactcctg gtggagtgac tccactggta aatagttaaa
     1201 caacaaaacc cttgtaaaac tgtctccctg caacccatcc ccttcccctt aaccaacttg
     1261 caatgctgtt catggagaat gttcagaagg ttgagataaa ggtatagtaa gattgattag
     1321 atgaagggaa aatagatgag accccttagt gtaatactta actgattcat ttacagatct
     1381 cacagagagg aatacgaagt gacacacaga gaaatggcag gctctcatgt taaccttttc
     1441 agttactaaa agcctgctta aggccatgag gaacatgaga agtttttttc cctctcctca
     1501 tggtttcttg cttttgtctt tatgtagagt ggtttcgatt caagaacttg gtagcatgac
     1561 ttcagtttca agatttgtat agagaaaaac atccacttaa aatccagaaa tgttttaaat
     1621 aataatctga aaattctgcc cgtttctctc agctagcatt tagcacatag tttatgcact
     1681 ctaagggtct ctgactggaa tttatattca tgtttgtctt tgtttttttt ccccttaatt
     1741 tgggtgggag ggtaatgtga ctataaccca ataaagattt ttaataacaa aaaaaa
//
