LOCUS       XM_039106634            1722 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus protein S100-A11-like (LOC100362296),
            mRNA.
ACCESSION   XM_039106634
VERSION     XM_039106634.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106634.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1722
                     /gene="LOC100362296"
                     /note="protein S100-A11-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100362296"
                     /db_xref="RGD:2318489"
     CDS             981..1277
                     /gene="LOC100362296"
                     /codon_start=1
                     /product="protein S100-A11-like"
                     /protein_id="XP_038962562.1"
                     /db_xref="GeneID:100362296"
                     /db_xref="RGD:2318489"
                     /translation="MPTETERCIESLIALFQKYNGKDKNSCQLSKTEFLSFMNTELAT
                     IRKNQKDPSVFDCMMNKLDLNSDGHLDSQEFPNLIGGLAIACHESFLQTSKKNI"
ORIGIN      
        1 tgtgggaaga gggttgtctc ctctgatttc tcaggagtgt ctgcacttct gaggatccag
       61 ctctctctcc cacaggattt gggtgcaggg agttctttgg ccggttcagt tcagtccttc
      121 gggcagacca gaaccgcagg taccggggac tgactggttc ctgttttcct gtgtccagaa
      181 gcactgtgca gtttcccatt ggaccaggga tgtgggcagg agtatgcaga agtggcagtc
      241 tgtcctacag tctcagggtg tctgacctca ggttttttta ttctatggat ttttgtggtg
      301 tccttgaccc ctcttgagaa atacaaaata gaaaactagt ccctagaact tttgccagtc
      361 tgatatttaa cgtgtcctgg gagtgttgtc tgatgaccga ctcattgatg ggtccaggaa
      421 gcaaactcta atgagaatga tgagtcaggg actgggttcc atcttttttc acagccatca
      481 ggatgaacag gatcatgaag agggctcgtt ttcacggtgt gccctgggaa cttcttttgt
      541 gatctagcat tcagcctgta aagtgggaca atggatgtca tatcactcct ctgtatctgt
      601 ttcctgccaa ccttaggatg ggcaaaggga tactggaagg ctgagatgct agtcaatggg
      661 ggatttatca gacgctggta ctgatgaaag agaaggaact atcacaccag ctggactggt
      721 taacatcagc ttttagcatt tccagagttc agcagtccca caggtgatcc ctggatccct
      781 ggatggagtc tgtcagccag gtgaaagagt gctgagatga gtgcagactc gcaacagaaa
      841 ttgaaattgt ctagtagttg aggaaggtaa gaaatcccaa caccaagagg aaaatcccat
      901 ttttaagaat aaacaggggt tttgtcccag tcaccatcaa cctcagttgc agctgtgcct
      961 tgctcctcaa cttggcacta atgcctacag agacagagag atgcattgag tccctgattg
     1021 ctcttttcca aaagtacaat gggaaggata aaaatagctg tcaactctcc aaaactgagt
     1081 tcctttcctt catgaacaca gagctggcca ccattaggaa gaaccagaaa gaccccagtg
     1141 tctttgactg catgatgaat aagctggacc tcaacagtga tgggcaccta gattcccaag
     1201 agtttcccaa ccttattggt ggcttagcta tagcatgcca tgagtctttc cttcagactt
     1261 ccaagaagaa tatctaaccc tgtccattca cttcctgcca gcaagtcatc accttctgca
     1321 cccccacacc ccatccacac ctgggctaag cctaccacac ataccacaca tgcagcccac
     1381 acctgattgg gaaaataaaa caatgtcatt ttttaatgta aaaaaaatta agcagggatg
     1441 ctgatctgga gtccatttaa tctgtggtag gcagatccac gtctgtggtt tcttgatttc
     1501 ctgaagtttg tgctaacttt tgcttactaa aggataaaca taatttcttg ccattgtatt
     1561 gaaatccatg ttttagaaac agtaagtaac ttgtgtttgt tataaactag aagtaaactc
     1621 atgcctctaa gacctagtaa aagatatagg cttaaaagcc acagaacatg ggtttgatcc
     1681 ccagctccga aaaaaaagaa ccaaaaaaaa aaaaaaaaaa aa
//
