LOCUS       XM_002730053            3316 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC100362216
            (LOC100362216), transcript variant X1, mRNA.
ACCESSION   XM_002730053
VERSION     XM_002730053.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002730053.7.
            
            On Jan 21, 2021 this sequence version replaced XM_002730053.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3316
                     /gene="LOC100362216"
                     /note="hypothetical protein LOC100362216; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 7 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     50 samples with support for all annotated introns"
                     /db_xref="GeneID:100362216"
                     /db_xref="RGD:2318569"
     CDS             124..987
                     /gene="LOC100362216"
                     /codon_start=1
                     /product="uncharacterized protein C2orf72 homolog isoform
                     X1"
                     /protein_id="XP_002730099.1"
                     /db_xref="GeneID:100362216"
                     /db_xref="RGD:2318569"
                     /translation="MESELEALAPRPASSTEPPFQALVEAAGGRGQVLLVGELWEREQ
                     SRALLRDFARAVFPPEPAPGKPGCTEAESAGTAAATEPHRAPGTKAERVIRSPLVFVL
                     CRAGSLTSREPRRHLREMLRDVRGRRQEGAALVGVLVADASAEDSGAPGLQLLETLLR
                     RVFGRQVGGPVQAAAFRPGCPASSLAVQEAACRALQAAGPGRPAEGAWERPGLPGLLT
                     CFSWGPRRQRKSQGVTSSQSPVQEHLQVSEEELALTPVFPNGDCEDRGNGSRAQDGVV
                     HMPPDPLGNTR"
ORIGIN      
        1 gacgggacag gagcgcgcag ggcgctgttg gcgggcaggg ggtccgggag gctcggccct
       61 cgggggcgtg tcggcagagg cggcggcgga gctcccagct tggcgcaaga ggcggcggcc
      121 agcatggaga gcgagctgga ggctttggcc ccgcggcccg cgagctccac ggagccgccc
      181 ttccaggcgc tcgtggaggc ggcgggcggc cgcgggcagg tgctgctggt gggcgagctg
      241 tgggagcgcg agcagagccg cgcgctgctg cgggacttcg cccgtgcggt gttccctccg
      301 gagcccgcgc cgggcaagcc gggctgcaca gaggccgaga gcgcgggtac ggcggcggcc
      361 acggagccgc atagggctcc gggaacgaag gcggagcgcg ttatccgctc gccgctcgtc
      421 ttcgtgctct gccgcgccgg atcgctgacc tcccgggagc ctcggcgcca cctgcgggag
      481 atgctgcggg acgtgcgcgg ccggaggcag gaaggcgccg cgctggtcgg ggtcctggtg
      541 gctgacgcga gtgcggagga ctcgggggcg cccggactgc agctgctgga gacgctgctg
      601 cgcagggtgt tcggccgcca agtcgggggc cccgtgcagg ctgcagcctt ccgtccgggc
      661 tgcccggcct ccagcctggc ggtccaggag gcggcctgca gggccctgca agctgcggga
      721 ccgggtcgac cagcagaagg tgcctgggaa agaccgggac tgcctggcct actgacttgc
      781 ttttcctggg gtcctcggag gcagaggaag agccaaggtg tcacctcctc tcaaagccca
      841 gttcaagagc acctccaggt ctcagaagag gagctggcac tgacacctgt atttcccaac
      901 ggggactgtg aagaccgtgg gaatgggtct agagcccagg atggagttgt ccacatgcca
      961 cctgatccct tggggaacac aagatgaaag ctggacccct ggactggccc taacctgcac
     1021 attgggctct ggcccttctc agtgagtctc cacatcacag tgttgacctc agcagatagt
     1081 gactgactat gaagacccca cttgcttgtg ggctgccact ctcactgttg ccagctcggc
     1141 gacgaggcct atgggacctg ctccacactg agtgtctttt tactctatgg tcatggtggg
     1201 ttgatcttgt ctctctgtgc ctttacttct ctgagccaag aagcctctgt aacggctttg
     1261 cagacatgtc actcagtctc tgggcttgtt tcccaaatga ccgaaggact gccaacccag
     1321 tggccttcca ccaggagcca cgttgcacct cccggcaaca ctggaaactt gtgtaaaagc
     1381 aattagtggg catctcacag tgcgtaggat ggaccagcta cttactttac tcagaatgct
     1441 cattgcaaca gttttaagaa atagaagggc caatcccttc tccctgtcat tctgggaaga
     1501 gatcccctta ggtttcctgg gatcttggct cccagaacaa gccaaaataa agacctgact
     1561 gttgctgtga gggagcctgt caggccagag ccaagatggc ttgtgtgttg cagggccagg
     1621 accaaaagcg ccttgcatgc tatgagaaaa aggggcctct gtctttctca tgttgacact
     1681 gattactgtg ccaaatcctt tgtggaagtg tttgctggga gctgccttta gcaccaagga
     1741 gagggaaagc cagggtattg gggtgcttag tcccccgact tgtactagat ctcaggtcct
     1801 agcccaagta tcccggaggt tctggaatct tcccttacag tctatgagtc acgtagggtg
     1861 ggtaaatatc ttccacagag cctgccaggg tatctactca tgcagaggca gctggggact
     1921 acctctcttg tccctgactg cccctagaga aatcagtctt tggaaggaca aaggccctta
     1981 ctggctttcc ctgatgtgtg gaaagtgctg tcagggggaa gtggataaat ccatgcaccc
     2041 atctgtaaga cactgcagat ccccagttgt gccgtactgt gcacagcttc ctgtgaggag
     2101 ctacatacct ttgagtcatg gtttcaactc tttctgtggt gatacaaagg gagaggaccc
     2161 tccctgctct gtgcctcaat ttcttcttgg tgatctagag cctaaccctg cccccttctc
     2221 agtctcaaga ataaaaactg tgaagtagag acagtgtctt ccctgaatga ggtgggagca
     2281 gacgccattt taataacgca aggtgatacc gtaggaaatg gtcccaacta gcatcttttt
     2341 attcaagaat gtagttcagc tagtagaggg ctagcctagc atactagttt gatccccatc
     2401 actgtataaa ccgaatgtag tgcacagacc tataacccca gtactttgga agtagagata
     2461 ggaggatcag aagttcaaat ccaccctcaa tgacaatgtg aattggaggc cagcctgggc
     2521 tacatgagac tctgtctcag aaaagaagaa agaaacaaaa agaactttga attttcagtt
     2581 tgatttggtt tttaaatggg aaaagtagta tatttgaagc tgctatgttt ttttgttacg
     2641 ctattgacct atgcagtcct ctataatcac aaaagtttta atccttgtta cttctgtatt
     2701 tgttacccat gttgaaactt aggaaccttc atatttaaat caacgtcgtt tccttggtta
     2761 gggaggattc atttcccatt ctggtctgtg gtgattcctc cccagccctc tcttggagtc
     2821 ccatccccac tgtacattac agggccattt gggtttgtag tctggtctaa agtgtgactt
     2881 aggcaccgat cacatcggtt gttggggttt taattgccta ctgcaggcct tgtcgctggt
     2941 ggaaaaggtc tttgtactga gtctggtttc tgcttcccat ctggtaaaac aggtgcagca
     3001 aacggcttcc tgtggctgcc ggtcttagta ctgtttctca gcagatagaa agacctgagt
     3061 ttcacccagg atggtcatgt gggccctgcc aggggacttt agaaagacgt gaaggttgga
     3121 gtggtctgag gaaaggctgg agacctggag gacaccaggg gtccctggga gcccagtgtg
     3181 aggaacagcc caggcagccc cactctgggt cctggggttc taacctgtaa tgtgatgatg
     3241 gtgcccctgc ttttgactcg aatgctggtt ctttacatct aataaaccag acagtgcctc
     3301 accatatcta atagaa
//
