LOCUS       NM_001260483            1123 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus prostate and testis expressed 6 like (Pate6l),
            mRNA.
ACCESSION   NM_001260483 XM_002727027 XM_002729928
VERSION     NM_001260483.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Rajesh,A. and Yenugu,S.
  TITLE     Genomic organization, tissue distribution and functional
            characterization of the rat Pate gene cluster
  JOURNAL   PLoS One 7 (3), e32633 (2012)
   PUBMED   22479333
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Oct 4, 2022 this sequence version replaced NM_001260483.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643286.25085.1,
                                           SRR26643297.27871.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-111               JAXUCZ010000008.1  42400723-42400833   c
            112-237             JAXUCZ010000008.1  42400370-42400495   c
            238-1123            JAXUCZ010000008.1  42398251-42399136   c
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q21"
     gene            1..1123
                     /gene="Pate6l"
                     /note="prostate and testis expressed 6 like"
                     /db_xref="GeneID:100361828"
                     /db_xref="RGD:2324568"
     exon            1..111
                     /gene="Pate6l"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..383
                     /gene="Pate6l"
                     /note="prostate and testis expressed C; Urinary protein
                     2-like; rCG22807-like"
                     /codon_start=1
                     /product="rCG22807-like precursor"
                     /protein_id="NP_001247412.1"
                     /db_xref="GeneID:100361828"
                     /db_xref="RGD:2324568"
                     /translation="MENLLKLCLFLLCFETGFPVQCVKCNSYKNGKCAGSQQTCTTRA
                     GEMCMIRRTWYASEINKLLHAETTCMGSCKIEEKTSGYLTIHTYCCDFTDFCNDIGFP
                     IVMT"
     exon            112..237
                     /gene="Pate6l"
                     /inference="alignment:Splign:2.1.0"
     exon            238..1123
                     /gene="Pate6l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtcattgc ttctcatcag ctgactggta ctaacacagc tggaagaatc tgcttaggag
       61 aaatggaaaa cctactgaag ctgtgcctct ttcttctctg ctttgaaaca ggcttccctg
      121 tacagtgtgt gaaatgtaat tcttacaaga acggaaaatg tgctggaagt cagcagacgt
      181 gcactacaag agctggtgaa atgtgtatga tacgcagaac ctggtatgca tctgaaatta
      241 ataaactgct acatgctgag actacgtgca tgggatcctg taaaatagaa gaaaaaacgt
      301 ctggatatct aacaatacat acctactgct gtgattttac agatttctgc aatgacatcg
      361 gttttccaat cgtaatgact tagcataagc tagtttcagt cgttctcatc agtcctttcc
      421 ttttcatttg gtctaaattt tcttacattg acctctattt ttactctgga ttatagattt
      481 ttctggtaat cagtattgta taagtcacag aacccaggga cattctttgc tcttctgaat
      541 gtatatttga tcatatagtc taattcttat gcttggcatc cctagcctta ttaccacgag
      601 tatagctgaa tcttgatttc tattaatgca tttatcacct cagtgtgtat ggctaagata
      661 agtaaatgag ttaaaaggtg taaactgtca ggaagactat gaacattcca agcatccttt
      721 gtatactatg tactttatga agttagaatt ttctacattg tgacttatac ttccaggata
      781 taatttaaag gaggtaagat tgttttgtat tctgttttgg cccttcactg tcttgtccca
      841 tgtctatagg cctgtgataa ggctaaattt caagacagca aaaggccatg gcacaccaaa
      901 actgctcacc tactggtatc ctgaaagtag caagacagag ttaggaccag agcaagatac
      961 gaaaaacact cagtggctta tgctcgttaa gtaggctaaa aagaaaggtg tctgaatgag
     1021 cttgtttcca tgaatgtcaa aataacagtg ctataaggcc atagtccaag tttcatcaaa
     1081 ttaagaaaat ctccacctac tgtttctgtt atattgttgc cag
//
