LOCUS       XM_039100358             543 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HIG1 domain family, member 1A-like
            (LOC100361671), mRNA.
ACCESSION   XM_039100358
VERSION     XM_039100358.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100358.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..543
                     /gene="LOC100361671"
                     /note="HIG1 domain family, member 1A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 67% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100361671"
                     /db_xref="RGD:2319702"
     CDS             262..543
                     /gene="LOC100361671"
                     /codon_start=1
                     /product="HIG1 domain family member 1A,
                     mitochondrial-like"
                     /protein_id="XP_038956286.1"
                     /db_xref="GeneID:100361671"
                     /db_xref="RGD:2319702"
                     /translation="MSTNTDLSLSPYDEGQGSKFIRKAKEKPFVPIGMAGFTAIVAYG
                     LYKLKSRGNTKMSIRLIHMRVAAQGFVVGGMTLGMGYFMYQEFWDKLKP"
ORIGIN      
        1 aaaacacagt tcactcagtt aatccaagtg gttcaaattg cttggacaaa actattgctt
       61 ttagcctaac ttcttttgag gtattgtatg ccaaaccttt cccttcaaga aacctactgc
      121 acggctgctg gcttctgatt ggctggggca agcagtggcc gcagcgggct aagccggtat
      181 tctagcactc cgggttggag gccagatgcc ggctggactg aaagggacgt cgcctctccg
      241 aagactcttc aagaaatcac aatgtcaacc aacacagacc tttctctatc tccatacgat
      301 gaaggtcagg ggtctaagtt tattcggaaa gctaaggaga aaccgtttgt ccccatcgga
      361 atggcaggct tcacagcgat tgttgcatac gggctgtaca agctgaagag caggggaaac
      421 acgaagatgt ccattcgctt gatccacatg cgtgtagcag cccagggctt tgttgtgggg
      481 ggcatgactc ttggtatggg ctatttcatg tatcaggaat tctgggataa gcttaagcct
      541 tag
//
