LOCUS       XM_039084378            1504 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC100360856
            (LOC100360856), transcript variant X1, mRNA.
ACCESSION   XM_039084378
VERSION     XM_039084378.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084378.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1504
                     /gene="LOC100360856"
                     /note="hypothetical protein LOC100360856; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100360856"
                     /db_xref="RGD:2321302"
     CDS             67..714
                     /gene="LOC100360856"
                     /codon_start=1
                     /product="uncharacterized protein LOC100360856 isoform X1"
                     /protein_id="XP_038940306.1"
                     /db_xref="GeneID:100360856"
                     /db_xref="RGD:2321302"
                     /translation="MFRQLLRQFRKESGDQGETTPREKEDDPLSSETGRRKSFWGRLG
                     ESWAEGGVSSGGFGRKASSQTVISKQEECLKELEELKFEIQKCQFERDELYQILDLYI
                     YDDWDHRLDVELPILQSEHEMRMMAMQMMTNSISDAMERYKELIQVNSSYCIRHSQLL
                     REQAQLKNKIQILLNEKRELLVEQTELPASSVEAKRFCEETGMNICDPRAKQQQV"
ORIGIN      
        1 agtgttgtgg tgacaccaac tgcctttggg atattccttc agttcccttt gggctcacaa
       61 gcaggcatgt ttcgccagct gctcaggcaa tttcgcaagg aaagtggaga tcaaggagag
      121 accacaccaa gggagaagga agatgacccc ctctctagtg aaacaggaag gaggaaatca
      181 ttctggggaa ggcttggtga gtcctgggca gagggaggag tatcctcagg aggttttggt
      241 aggaaggcat catcccaaac tgtcatcagt aagcaagagg agtgtctaaa ggaactggag
      301 gaactcaaat ttgaaatcca gaagtgtcaa ttcgagaggg atgaacttta tcaaatcctg
      361 gacctttata tctatgatga ttgggaccac aggctggatg tcgaattgcc aatacttcaa
      421 tccgaacatg agatgagaat gatggctatg caaatgatga ccaactcaat aagtgatgcc
      481 atggagaggt acaaggagct catacaagtg aacagttcct actgcatcag gcactcccag
      541 ctcctgcgtg aacaagctca attgaagaac aaaatacaga ttttgctgaa tgagaagaga
      601 gaactgctgg tggagcagac tgaactgcca gcatcctcag tggaggcaaa gaggttctgt
      661 gaagagaccg gaatgaacat atgtgacccc agagccaagc aacagcaggt ctgaaattct
      721 ccagcagaaa ctcgaacatg acacagacca ggacaagatc tcccttggtg agaagagcta
      781 caggaggaga acaaagtgtg cacagcaaat acaccactat tgtatctcat ctgtaatgtc
      841 catagcaatt gtggactcca ctttcctcct ttagtttaac ttcttcggag tgaataggcc
      901 gtactttcac ttcgcctctc tccagcaagt gtgcactttt ggagggactc agagaagtgc
      961 tgatgcacat caatcaagag ctgctggtca tccagaaaga ctatgcacat ttaaatttgt
     1021 acttgtcctg atgggtcatc cagaagagtt tcatggagat cagttcacaa tattggaaag
     1081 actttgagac aaagtctgta atatcattta tactcaatat tggatggctt tttccttaat
     1141 atccccactc caacaaaaca gacctacttc cactcttctt gataagatta ttaccatcag
     1201 taactgcttg tctactatgt ctccaaggca agccacaggc tataagttta ttctgcaaaa
     1261 ggagcagcta aagaatgctt agcgcaattc ctctatttaa agtttggttg agttttgatt
     1321 attttggtta tttggttttc ctcctattca tttgaagttt tgttatttat gtgttgttgt
     1381 tttgttcatt tggttttcta ttttgataag ggtatagact gtatatattg actacctgca
     1441 tctggttact atcaagtaaa ttggatgtat tctggtcaat aaaggagtaa tctcaaactc
     1501 ttca
//
