LOCUS       XM_039099022             820 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tumor protein,
            translationally-controlled 1 (LOC100360791), mRNA.
ACCESSION   XM_039099022
VERSION     XM_039099022.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099022.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..820
                     /gene="LOC100360791"
                     /note="tumor protein, translationally-controlled 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 12 ESTs, 40 long SRA reads, 12 Proteins,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:100360791"
                     /db_xref="RGD:2321467"
     CDS             95..613
                     /gene="LOC100360791"
                     /codon_start=1
                     /product="translationally-controlled tumor protein-like"
                     /protein_id="XP_038954950.1"
                     /db_xref="GeneID:100360791"
                     /db_xref="RGD:2321467"
                     /translation="MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAID
                     DSLIGGNASAEGPEGEGTKSTVVTGVDIVMNHHLQETSFTKEAYKKYIKDYMKSLKGK
                     LEEQKPERVKPCMTGAADQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFM
                     IFFKDGLEMEKC"
ORIGIN      
        1 tctgcccgct cccccctccc ccccgagcgc cgctccggct gcaccgcgct cgctccgcga
       61 tgtcaggcta gcgccactgt ccccagccgt caccatgatc atctaccggg acctcatcag
      121 ccatgacgag ctgttctccg acatctacaa gatccgggag atcgcggacg ggctgtgcct
      181 ggaggtggag ggcaagatgg tcagtagaac agagggtgcc atcgatgatt cactcattgg
      241 tggaaatgct tccgctgaag gtccggaggg cgaaggtacc aaaagcacag tagtcaccgg
      301 tgttgacatt gtcatgaacc atcacttaca agaaaccagc ttcacaaaag aggcctacaa
      361 aaagtatatc aaagactaca tgaaatcact caagggcaaa cttgaagaac agaaaccaga
      421 aagggtaaag ccttgtatga ctggagctgc agatcaaatt aagcacatcc ttgctaattt
      481 caataactac cagtttttta ttggtgaaaa catgaatcca gatggcatgg ttgctctcct
      541 ggactaccgt gaagatggtg tgactccatt catgattttc tttaaggatg gcttagagat
      601 ggaaaaatgt taacaaattg gatctatcgc ctgtcaccat aattggctgc tgcttaccat
      661 ccataaaaca ccaggactta ggacaaatgg gactgatatc atcttgacct tttattttga
      721 ccgtgattta tttggagtgg aggcattgtt tttttttttt tttttaagaa aaaaaaaaaa
      781 catgtcatgt gggttgtcta aaaataaagt gcatttaaat
//
