LOCUS       XM_039100128            1757 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eukaryotic translation elongation
            factor 1 alpha 1-like (LOC100360413), mRNA.
ACCESSION   XM_039100128
VERSION     XM_039100128.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100128.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1757
                     /gene="LOC100360413"
                     /note="eukaryotic translation elongation factor 1 alpha
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1085 ESTs, 34 long SRA reads, 86
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100360413"
                     /db_xref="RGD:2322143"
     CDS             77..1465
                     /gene="LOC100360413"
                     /codon_start=1
                     /product="elongation factor 1-alpha 1-like"
                     /protein_id="XP_038956056.1"
                     /db_xref="GeneID:100360413"
                     /db_xref="RGD:2322143"
                     /translation="MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK
                     EAAEMGKGSLKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNM
                     ITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEP
                     PYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTR
                     KDGSASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM
                     VVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPP
                     MEVAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPK
                     FLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGK
                     VTKSAQKAQKAK"
ORIGIN      
        1 acagaaccgc tttttcgcaa cgggtttgcc gtcagaacgc aggtgttgtg aaagccaccg
       61 ctaattcaaa gcaaaaatgg gaaaggaaaa gactcacatc aacatcgtcg taattggaca
      121 cgtagattcc ggcaagtcca ccacaaccgg ccacctgatc tacaaatgtg gtggaatcga
      181 caaaagaacc attgaaaagt ttgagaagga ggctgcggag atgggaaaag gctccttaaa
      241 gtatgcctgg gtcctggaca aactgaaagc tgagcgtgag cgtggtatca ctattgacat
      301 ctccctgtgg aaatttgaga ccagcaagta ctatgtgact atcattgatg ccccaggaca
      361 cagggacttc atcaagaaca tgattacagg cacatctcag gctgactgcg ctgtcctgat
      421 tgttgctgct ggtgttggtg aatttgaagc tggtatctcc aagaacgggc agacccgtga
      481 gcatgctctt ctggcttaca ctttgggtgt gaaacagcta attgttggtg tcaacaaaat
      541 ggattccacc gagccaccat acagtcagaa gagatacgag gaaatcgtta aggaagtcag
      601 cacctacatt aagaaaattg gctacaaccc tgacacagta gcatttgtgc caatttctgg
      661 ttggaatggt gacaacatgc tggagccaag tgctaatatg ccgtggttca agggatggaa
      721 agtcacccgc aaagatggca gtgccagtgg caccacgctg ctggaagctt tggactgcat
      781 tctgccgcca actcgtccaa ctgacaagcc tctgcgactg cccctccagg atgtctataa
      841 aattggcggc attggcactg tccccgtggg ccgagtggaa actggtgttc tcaaacctgg
      901 tatggtggtt acctttgctc cagtcaatgt aacaactgaa gtcaagtctg tggaaatgca
      961 ccatgaagct ttgagtgaag ctctgcctgg ggacaatgta ggcttcaacg taaagaacgt
     1021 gtctgtcaaa gacgttagac gtggcaatgt tgctggggac agcaaaaatg acccaccaat
     1081 ggaagtagct ggcttcactg ctcaggtgat tatcctgaac catccaggcc agatcagtgc
     1141 tggctatgcc cctgttctgg actgccacac ggcccacata gcatgcaagt ttgccgagct
     1201 taaagagaag atcgatcgtc gttctggtaa gaagctggaa gatggcccca aattcttgaa
     1261 gtctggtgat gctgccattg ttgacatggt ccctggcaag cccatgtgtg ttgaaagctt
     1321 ctctgactac cctccacttg gtcgttttgc tgttcgtgac atgaggcaga cagttgctgt
     1381 gggtgtcatc aaagccgtgg acaagaaggc tgcaggagct ggcaaagtca ccaagtctgc
     1441 ccagaaagct cagaaggcta aatgaatatt atccctaaca cctgccaccc cagtcttaat
     1501 cagtggtgga agaacggtct cagaactgtt tgtctcaatt ggccatttaa gtttaatagt
     1561 aaaagactgg ttaatgataa caatgcatcg taaaaccttc agaaggaaag aatgttttgt
     1621 ggaccatttt ttttgtgagt ggcagtttta agttattagt tttcaaaatc agtacttttt
     1681 aatggaaaca acttgaccaa aaatctgtca cagaattttg agaccattaa aacaagttta
     1741 atgagaaaaa aaaaaaa
//
