LOCUS       XM_008773323             999 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus BRCA2-interacting protein-like
            (LOC100360296), transcript variant X1, mRNA.
ACCESSION   XM_008773323
VERSION     XM_008773323.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008773323.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008773323.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..999
                     /gene="LOC100360296"
                     /note="BRCA2-interacting protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100360296"
                     /db_xref="RGD:2322455"
     CDS             212..931
                     /gene="LOC100360296"
                     /codon_start=1
                     /product="cancer/testis antigen 55-like isoform X1"
                     /protein_id="XP_008771545.2"
                     /db_xref="GeneID:100360296"
                     /db_xref="RGD:2322455"
                     /translation="MLSLLRWISTFFHGSNTSEEISEEQPQDNTRLKSIQGVVTSLCN
                     YYGWINDSILFNVEVISDNVPLKIGTNVLALVEQDEVTHTLKTIKVKVMTDLPEGSEP
                     SKLGKRLCIRCVTSVTEEDVYISEDVSFPLYLFSGAFKPFKGDLVLVEYSMNSGMSNI
                     NIHSVSPLSCQDINEVYVTSIDGRNGMVEARVFFTLDSLQIPSGYTPGLYDIVDVVTV
                     DSIQQHCSLRAVSVTPVQVEI"
ORIGIN      
        1 aaatttgcct ttgaagcaga gggagcttta tgggaagctg gcagtaggtg aggaggtacc
       61 cagacactgg ctctcctaag agcttcatct tagccattca ctccatcaca cagaggctgg
      121 ggaacggggg ccataaactg agtgagacaa aggaagtctg ctgaatcatc tgtaaccctc
      181 ggacactggc tgggctggag gtgatatcac catgttgagc cttctacggt ggatatccac
      241 attctttcac gggagcaaca cgtctgaaga aatatcagag gaacagcctc aagataacac
      301 caggttgaag tctattcagg gagtggtcac ctctctgtgc aattactatg gctggatcaa
      361 tgactccatc ctcttcaacg tggaggtaat cagtgacaat gtgcctctga agatcgggac
      421 caatgtcctt gcgcttgtgg aacaagatga agtaactcat accctgaaaa caatcaaggt
      481 gaaagttatg actgatcttc ccgagggcag tgagccgtca aaacttggca aaaggctttg
      541 tattagatgt gtcacctctg taactgaaga agacgtgtat atcagcgagg acgtgtcttt
      601 cccattatac ctcttttctg gcgcattcaa acctttcaaa ggagacttgg ttctggttga
      661 gtattccatg aattcgggca tgtcaaacat caatatccac tctgtgagcc ccctcagctg
      721 tcaggatatc aatgaggtct atgttactag cattgatgga agaaatggca tggtagaagc
      781 cagagtcttt ttcacccttg actctctcca gataccttct gggtatacac ctggattata
      841 cgacattgta gatgtggtca ctgtcgacag tatccagcaa cattgttcac tgagggcagt
      901 atcagtgacc ccagtacaag tggagattta accagaccta caattcgctt tccggcttat
      961 gcccaaggtt ctggtttaat aaaataatgt tgcgtgtaa
//
