LOCUS       XM_039094891            1715 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus chromobox homolog 3-like
            (LOC100360260), transcript variant X2, mRNA.
ACCESSION   XM_039094891
VERSION     XM_039094891.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1715
                     /gene="LOC100360260"
                     /note="chromobox homolog 3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     ESTs, 12 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 66 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100360260"
                     /db_xref="RGD:2322491"
     CDS             48..599
                     /gene="LOC100360260"
                     /codon_start=1
                     /product="chromobox protein homolog 3-like"
                     /protein_id="XP_038950819.1"
                     /db_xref="GeneID:100360260"
                     /db_xref="RGD:2322491"
                     /translation="MASNKTTLQKMGKKQNGKSKKAEEAEPEEFVVEKVLDRRVVNGK
                     VEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS
                     KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEVNMKC
                     PQIVIAFYEERLTWHSCPEDEAQ"
ORIGIN      
        1 gccctgagca tctgagtgct cttcaagtct ccgattaaat tttaaaaatg gcctccaata
       61 aaactacatt gcaaaaaatg ggaaagaaac agaatggaaa gagtaaaaaa gctgaagagg
      121 cagagcctga agaatttgtg gtagaaaaag tactggaccg tcgtgtagtg aatgggaagg
      181 tggagtattt cctgaagtgg aaggggttca cagatgctga taatacttgg gaaccagaag
      241 aaaatttaga ttgtccagaa ttaattgaag catttcttaa ttctcaaaaa gctggtaaag
      301 aaaaagatgg tacaaaaagg aaatctttat ctgacagtga atctgatgat agcaaatcga
      361 agaagaagag agatgctgct gacaagccca ggggctttgc caggggcctt gaccctgagc
      421 gaataatcgg tgccacagac agcagtggag agctaatgtt tctcatgaaa tggaaggact
      481 cagatgaagc tgacttggtg ctggcaaagg aggtgaatat gaagtgtcct cagattgtca
      541 tcgccttcta tgaggagagg ctgacttggc attcttgtcc cgaagatgaa gcacaataat
      601 tgtttgcatt tatatatata tatatattta tatatatata tataatctgg atcttgggtt
      661 ttgaattact agtgtggaaa aaatagcatt ctaatgaaaa tcaagtttga tatgctggtt
      721 ttgaaagtat tgacagtagt tgggatattt ttggtttttg ttctgcatca aaaggcactg
      781 attcctttga gcaagtgaga gctttctgta gttgcttcct ttaacagcag aatatttgat
      841 accatgttgt atttcctcag ctttgaagaa cagcttttct taattgctgg ggagatttta
      901 cagtcattac tcaagtcaga acttattttt aactgggaca cagaaggacc attctgggtt
      961 tttttgtttg tttgttcgta tgcagtgtat gcataaaaca cttacataac ctgcctgttt
     1021 tatctttttt ttttttaata ctcaaaagaa ctgactgtga aaacgcaagt tgatgagatt
     1081 ccatcaccgt gaatgttctc ctgaaaccat aacctttcag aataagcaga gtctgtaatt
     1141 tattggatag tttatttaca gaatgttgtc cataccaaca ccccttcagg aaatggaatt
     1201 agacaacata gtagtatgat ttaatagcaa gacttggccg agtatggtgg tgtgcatctt
     1261 taatcccaga actctggagg caggtggagc tctgatttaa gaggcccctg gtctacagag
     1321 gcaggtccag gtcagtgggt ctgtgtaaag gttcctctgg tgaaccattc ctttgtagga
     1381 cgttaaaatc tgtactaaaa ggttatgatt catggaatct gtttgatgtg gaaatagaat
     1441 catggttgga gctgatgttg gcgatttaag acctgctgac taagtgagtg aacaaaattt
     1501 gctaatatca attagtgccc tgcatgcctt tcctttaccc tgactcattc cttacgggta
     1561 ggatcaatct tttcagtatt tgcattctgg ttcaattagc cagaaaagga actttgtagt
     1621 gtcagaatgt catccaactg tatatttact ttattgtaaa taatggtgaa cagtggtcaa
     1681 taaatagttt tatattcctt taaaaaaaaa aaaaa
//
