LOCUS       XM_039113214            1435 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mCG18732-like (LOC100360061),
            transcript variant X1, mRNA.
ACCESSION   XM_039113214
VERSION     XM_039113214.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039113214.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1435
                     /gene="LOC100360061"
                     /note="mCG18732-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 6 Proteins, and
                     95% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100360061"
                     /db_xref="RGD:2322884"
     CDS             63..1148
                     /gene="LOC100360061"
                     /codon_start=1
                     /product="endosome-associated-trafficking regulator 1-like
                     isoform X1"
                     /protein_id="XP_038969142.1"
                     /db_xref="GeneID:100360061"
                     /db_xref="RGD:2322884"
                     /translation="MSGYARRQGAPPLSRTRSLVVPDDFGYGKGKCTKQGPSGAHETR
                     FGGDKLEDLEEANPFSFKEFLKTKNLSLSKEDTATSRIYQKEASRHPLGLDHNSPVSQ
                     PMGYGLEYQQPFFEDPTRASNLEEDEEDGWSRAYLPSAVEQTHSTRATQNSSPCGTYL
                     SFFSNASELAGPESLPPWTLSDTDSRLSPASPAGNPNVDFAAHEESLGDRHLRTLQLS
                     YEALKDENSKLRRKLSEVQSFSETQTEMVRTLERRLEAKMIKEESDFHDLESVVQQVE
                     QNLELMTAQLSNFKRENEALRSGQGASLTVVKQNTDVALQNLHVVMNSAHASIKQLVS
                     GAETLNLVTEILKSIHRITEVKDEADS"
ORIGIN      
        1 tgaggcaggg gctggcgacc gcgttgtggg ccatggggcc gcggccgggt tagggcgcgg
       61 cgatgtcggg ctacgcgcgg cggcagggcg cgcccccact atcgcggacg cggagcctcg
      121 tagttcccga cgattttggc tatggaaagg ggaaatgtac taaacaaggt ccctcgggag
      181 cccatgagac gcgctttgga ggtgacaaac ttgaagacct tgaagaagcc aatccattct
      241 ccttcaaaga gtttttgaaa accaagaacc tcagcctgtc aaaagaagac acagccacca
      301 gtcgaattta ccagaaggag gcctcgaggc acccactggg actagaccac aactcccctg
      361 tctcccagcc catgggatat ggcctggaat atcagcagcc attttttgaa gacccaacaa
      421 gagccagcaa cctagaggag gatgaagagg acgggtggag cagagcctac ctgccgtctg
      481 ccgtggagca gactcactcc acgagagcca cgcagaactc atcgccctgt ggcacctacc
      541 tttccttctt ttccaacgcg tcagagctgg caggtcctga gtctttgccc ccatggacac
      601 tgagtgacac tgactccagg ctctccccag cgtctccagc tgggaatcct aatgtagact
      661 ttgcagctca tgaagaatcc ttaggggaca gacacctgcg gacgctgcag ttaagttacg
      721 aagcactgaa agatgaaaac tctaagctca gaagaaagct aagtgaggtt cagagcttct
      781 ctgaaactca aacagaaatg gtgaggacgc tcgaacggag gttggaggcg aagatgatca
      841 aggaagagag tgacttccat gacctggagt cagtagtcca gcaagtcgaa cagaacctcg
      901 aactgatgac cgcacagctc tccaacttca agcgagaaaa cgaagccctg cggtcaggcc
      961 agggtgccag ccttaccgtg gtgaagcaga acaccgatgt ggccttgcag aacctccatg
     1021 ttgtcatgaa cagtgcacac gcatctataa agcagctggt gtctggagca gagacactga
     1081 accttgttac tgaaatcctc aagtctatcc acagaattac tgaagttaag gatgaggcag
     1141 actcttgaga acacgacctg ccgccgggtc ccggcacctc tgcaccgatg gcaccacaca
     1201 gcttccaact gtgctcctaa ctaagcagtc ctcaccaaac catctcacag cctaagcacg
     1261 tgaccgggca cctgcagtac agggctcctt tccaccggtt gcacctaaca gtttacatga
     1321 agtcctttgg ggaagtccca ctgtttgata gactcactga tttactggaa gacattttta
     1381 taaaacccag caatttttag aaagcactaa agctgaaaca acagtttggt aaaaa
//
