LOCUS       XM_039111019            1897 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus heterogeneous nuclear
            ribonucleoprotein K-like (LOC100359916), mRNA.
ACCESSION   XM_039111019
VERSION     XM_039111019.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111019.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1897
                     /gene="LOC100359916"
                     /note="heterogeneous nuclear ribonucleoprotein K-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 28 ESTs, 2 long SRA reads, 17 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100359916"
                     /db_xref="RGD:2323128"
     CDS             60..1451
                     /gene="LOC100359916"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein K-like"
                     /protein_id="XP_038966947.1"
                     /db_xref="GeneID:100359916"
                     /db_xref="RGD:2323128"
                     /translation="METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVE
                     LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILK
                     KIIPTLEEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGII
                     GVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPI
                     KGRAQPYDPNFYDETYDYGGFTMLFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPS
                     RRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGWPGDRYD
                     GMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV
                     TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDWIITITGTQDQIQNAQYL
                     LQNSVKQYSGKFF"
ORIGIN      
        1 tggcggccgg gaggcaacgg cggactcgcg cgattggtgg atccatttag ttcaagaaaa
       61 tggagaccga acagccagaa gaaaccttcc ctaacaccga aaccaatggt gaatttggta
      121 aacgccctgc agaagatatg gaagaggaac aagcctttaa aagatctaga aatactgatg
      181 agatggttga attgcgcatt ttgcttcaga gcaagaatgc tggggcagtg attggaaaag
      241 gaggcaagaa tattaaggct ctccgtacag actacaatgc cagtgtttca gtcccagaca
      301 gcagtggccc cgagcgcata ctgagtatca gtgctgatat tgagacgatt ggagaaattc
      361 tgaagaaaat catccctact ttggaagagg gcctgcagtt gccatcaccc gctgcaacca
      421 gccagctccc gctcgaatct gatgctgtgg aatgcttaaa ttaccagcat tataaaggga
      481 gtgacttcga ctgcgagctg agactgttga ttcatcaaag tctggccgga ggaattattg
      541 gtgttaaagg tgctaaaatc aaagaacttc gagaaaacac tcagacaaca atcaagcttt
      601 tccaggaatg ctgccctcat tctactgaca gagttgttct tattggagga aagcccgata
      661 gggttgtaga atgcatcaag atcatccttg accttatatc tgagtctccc atcaaaggac
      721 gtgcacaacc ttatgatccc aacttctatg atgaaaccta tgattatggt ggttttacaa
      781 tgttgtttga tgaccgccga ggacgacctg tgggattccc catgcgggga agaggtggtt
      841 ttgacagaat gcctcctggt cggggtgggc gtcccatgcc tccttctaga agagattatg
      901 atgatatgag ccctcgtcga ggaccaccac caccaccacc tggtcgaggt ggacggggtg
      961 gcagcagagc tcggaatctt cctcttcctc ctccaccacc acccagaggg ggagatctca
     1021 tggcttacga cagaagagga tggcctggag accgctatga tggcatggtt gggttcagtg
     1081 ctgatgaaac ttgggactct gcaattgaca catggagccc atcagaatgg caaatggctt
     1141 atgaaccaca gggtggttct ggatatgatt attcttatgc agggggccgt ggctcgtatg
     1201 gtgatcttgg cggacctatt atcactacac aagtaactat tcccaaagat ttggctggat
     1261 ctattattgg caaaggtggt cagcggatta aacaaattcg tcatgagtct ggagcatcta
     1321 tcaaaattga tgaaccttta gaaggatctg aagattggat cattaccatt acgggaacac
     1381 aggaccagat acagaacgca cagtatttgc tgcagaacag tgtgaagcag tattctggaa
     1441 agtttttcta agactagtga agaactgaag gagtcctgca tctttttttt tatctgcttc
     1501 tgtttaaaaa gccaacattc ctctgcttcc taggtgttct gcatttgagg tgtagtgaaa
     1561 tctttgctgt tcaccagatg taatgtttta gttccttaca aacagggttg gggggagggc
     1621 atgcaaaaaa actaacattg aaattttgaa acagcagcag agtgagtgac ttttattttt
     1681 tgttcattgt tggtggtttt aaaaattccc cccgtgtaat tattgtgaac accttgcttt
     1741 gtggtcactg taacattggg gggtgggaca gggaggaaag taatagtcca catgtccctg
     1801 gcatttgttc agagcagtgt gcagaatgta atgctctttt gtaagaaacg ttttatgatt
     1861 tttaaaataa atttagtgaa tctaaaaaaa aaaataa
//
