LOCUS       XM_039094077             400 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mCG20085-like (LOC100359732), mRNA.
ACCESSION   XM_039094077
VERSION     XM_039094077.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094077.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..400
                     /gene="LOC100359732"
                     /note="mCG20085-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins, and 53%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100359732"
                     /db_xref="RGD:2323508"
     CDS             1..318
                     /gene="LOC100359732"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 variant 1-like"
                     /protein_id="XP_038950005.1"
                     /db_xref="GeneID:100359732"
                     /db_xref="RGD:2323508"
                     /translation="MAATTGSGVKVPQNFSLLEELEEGQKGVGNGTVSWGLEDIEDMT
                     LIRWTGMIIGPPRVYPRAMAMLAKWQNSHSNKVILQELRRLMMSKENMKLPQPPEGQC
                     YSN"
ORIGIN      
        1 atggcagcca ccacaggctc aggagtaaaa gtccctcaaa atttcagtct gttggaagag
       61 ctggaagaag gccaaaaagg agtaggcaat ggcacagtta gctggggtct ggaggacatt
      121 gaggacatga cactcataag atggacaggc atgataattg gtcctccacg ggtgtatcca
      181 cgagccatgg caatgctggc aaagtggcag aattcccaca gcaacaaagt catcctgcag
      241 gaactgaggc gcttgatgat gtcaaaagag aacatgaagc tgccacagcc accagaagga
      301 cagtgttaca gcaattagtc accaaggccc cggcctccct tccccatcca acacaagtct
      361 tcattttcca cagtagtgaa ttttctagat ccatctgtag
//
