LOCUS       XM_039103509            1315 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eukaryotic translation initiation
            factor 1-like (LOC100359700), mRNA.
ACCESSION   XM_039103509
VERSION     XM_039103509.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103509.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1315
                     /gene="LOC100359700"
                     /note="eukaryotic translation initiation factor 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 27 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100359700"
                     /db_xref="RGD:2323540"
     CDS             812..1159
                     /gene="LOC100359700"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 1-like"
                     /protein_id="XP_038959437.1"
                     /db_xref="GeneID:100359700"
                     /db_xref="RGD:2323540"
                     /translation="MRPSPMSAIQNLHSFDPFADASKGDDRLPAGTENYIRIRIQQRN
                     SRKTLTTVQGITDDYDKKKLVKAFKKKFACNGAVIDPPDYIQLQGAQRKNVCQLLIET
                     GLAKDGQLKVHGF"
ORIGIN      
        1 aatgtccagt gtatcctaac tggcctttgg gatgtttcct gttaaagtac aagccatctg
       61 atgtcagact ctgcctatgc aattggcaga gaatacctca gtcctgtcag ccaggctgca
      121 acatggtcaa cacttgaaac actttcctcc aacttgttac tcattaaact gtatttttat
      181 gagagtttcc atagagatgt actcaatgcg tggagacaca cctatgtttt ctattgtaac
      241 tcctgtgggg cttccaactg tgtattgttt tagttatttt ctggttttat atgcttatta
      301 tttaaacggc ccgctgaata ctcgtatcac cattaatcta acactatttt ctaaatatat
      361 cagcttatca gcttgaaaca ccctatcaca tcttaatgca tacatcattc tcaagtttgc
      421 cttctgaatt ttagtttata ctgctttcta taatgctgtg acagttccaa aattagtgtc
      481 tatttattga agtaatatgg ggtattatta tgctatagaa ataccttact atgtaactcc
      541 atttctgttt caggtaaact ttggaatcca ggcagttaaa aaagctgaag aattcattgt
      601 atacttctga tacgttcttg tgcatcttat gcttccattt acactgtata aaaataactt
      661 gggcatgttg tttaggatct cattattcca ttgtttaaaa tgtaaggctc ggacccagtc
      721 actgagccac cgatgaggac tcagctgcct cctcctccag ccccctcgtt cctaatgctc
      781 catacacacc ctgacccctg ccttctcccg catgcggccg tctcctatgt ctgctatcca
      841 gaaccttcac tctttcgacc cctttgctga tgcaagtaag ggtgatgacc ggcttcctgc
      901 tggcaccgag aattatatcc gtataagaat tcaacagaga aacagcagga agacccttac
      961 aactgtccaa gggatcactg atgattacga taaaaagaaa ctagtgaaag cgtttaagaa
     1021 gaaatttgcc tgcaatggtg ctgtaattga ccctccagac tatattcagc tacagggtgc
     1081 tcagcgcaag aacgtgtgtc agctcctgat agagactgga ctggctaagg acggtcagct
     1141 gaaggttcat gggttttaag tccttgtggc tctctgaagc ttaagtgagg atttccttgc
     1201 aatgaggaga atttcccttc tgtcccttgt cacaagttta aaaacctcac agcttgtata
     1261 atgtaatcat ctggggggcc actttcaact tggattatgc aataaatgga gaaga
//
