LOCUS       XM_039088753             792 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein L29-like
            (LOC100359671), mRNA.
ACCESSION   XM_039088753
VERSION     XM_039088753.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..792
                     /gene="LOC100359671"
                     /note="ribosomal protein L29-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 63% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100359671"
                     /db_xref="RGD:2325059"
     CDS             1..792
                     /gene="LOC100359671"
                     /codon_start=1
                     /product="60S ribosomal protein L29-like"
                     /protein_id="XP_038944681.1"
                     /db_xref="GeneID:100359671"
                     /db_xref="RGD:2325059"
                     /translation="MQRIKERCLGIEEHTGSTSSVRLRLGGPLQKRRQNECKSRKQLP
                     AIRKQCLTIKNLIYSCIKKYWLRLLVPGAAGAAGYSTDTAKSKNHTTHNQSLKWHRNG
                     IKKSQSQRYKSLREVDKFLRNMCFAKKQNKKGLKKMQANNAKAVSAQAEAIKALVKPQ
                     AIKPKMPKGPSPSHLAFIAHPKLGKRIRSSTAKGCRLCQPKPKVQTMAEAKAPAKAQA
                     SAPAQAPKGAQAPVKAHDKMPLSIANIWRRANLLIADQITSAYKA"
ORIGIN      
        1 atgcagagaa taaaagaaag atgcttaggc atcgaagaac acacaggcag cacctcctcc
       61 gtccgtctga ggctcggggg accattgcag aagagaagac agaatgaatg taagagccgg
      121 aagcagctgc cggctatcag gaaacagtgt cttaccatta aaaatctcat atactcatgc
      181 attaagaagt attggcttcg tcttctggtc ccaggtgctg caggagctgc tggttacagt
      241 acagacacgg ccaaatctaa gaaccacacc acacacaacc agtccctcaa atggcacaga
      301 aatggtatca agaaatccca gtcacaaaga tacaaatctc ttagggaggt tgacaagttc
      361 ctgaggaaca tgtgctttgc caagaagcag aacaagaaag gcctgaagaa gatgcaggct
      421 aacaatgcaa aggcagtgag tgctcaagca gaggccatca aggcccttgt gaagcctcag
      481 gccatcaagc ccaagatgcc aaagggcccc agccccagcc atctggcttt cattgctcac
      541 cccaagcttg ggaagaggat tcgaagctcc acagccaagg gttgtagact ctgccaacca
      601 aagcccaagg ttcaaaccat ggcagaggcc aaagctccag ctaaggccca ggcttcagct
      661 ccagctcagg ctcccaaagg tgcccaggcc cctgtgaagg ctcatgacaa aatgcctctc
      721 agcattgcga acatctggag gagggccaac ttgcttatag cagatcaaat cacctctgct
      781 tataaagcct ag
//
