LOCUS       XM_056985572            2013 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus karyopherin alpha 2-like
            (LOC100359600), mRNA.
ACCESSION   XM_056985572
VERSION     XM_056985572.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985572.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2013
                     /gene="LOC100359600"
                     /note="karyopherin alpha 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 35
                     ESTs, 1 long SRA read, 16 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100359600"
                     /db_xref="RGD:2325125"
     CDS             153..1742
                     /gene="LOC100359600"
                     /codon_start=1
                     /product="importin subunit alpha-1"
                     /protein_id="XP_056841552.1"
                     /db_xref="GeneID:100359600"
                     /db_xref="RGD:2325125"
                     /translation="MSTNENANSTAARLNRFKNKGKDSTEMRRRRIEVNVELRKAKKD
                     DQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVEDIVKGINSNNLESQLQATQAARK
                     LLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVD
                     GGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKHGAIDPLLALLAVPDL
                     SSLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAIS
                     YLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDA
                     GALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLIGVLSKADFK
                     TQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQA
                     AEKLGETEKLSIMIEECGGLDKIEALQSHENESVYKASLNLIEKYFSVEEEEDQNVVP
                     ETTSEGFAFQVQDGAPGTFNF"
ORIGIN      
        1 taagaagagt tatgtcgaca caaagtctga gggctgaggg ctagtggacg tttcgacagc
       61 cgccgacccg cagcttgaga gccctgcacc gactttcgtg gaagtctgaa ccggctgtgc
      121 agctttcctt cctccttgtt cctgcagcaa ccatgtccac caatgagaat gctaactcaa
      181 cagctgcccg gcttaacaga ttcaagaaca aggggaaaga cagtacagaa atgcggcgcc
      241 gccgaataga ggttaatgtg gaacttagga aagctaaaaa agatgaccag atgctgaaaa
      301 ggaggaacgt cagctcattc cctgatgacg ctacttctcc actacaggaa aaccgaaaca
      361 accagggtac tgtaaattgg tctgttgagg acattgttaa aggcataaac agtaacaatt
      421 tggaaagcca gctccaagct actcaagctg ctcggaaact gctttcaaga gagaagcagc
      481 ctcctataga caacatcatc cgggctggtt tgatcccaaa atttgtgtcc ttcttgggca
      541 aaacggattg tagtcccatt cagtttgaat ctgcttgggc gctcaccaac attgcttctg
      601 gaacatccga acagaccaaa gctgtggtgg atggaggtgc tatcccagca tttatttctc
      661 tcttggcgtc gccccatgct cacatcagcg agcaagctgt gtgggctctt ggaaacattg
      721 caggtgatgg ctcagttttc cgagacttgg ttatcaaaca tggtgcaatt gacccactgt
      781 tggcacttct cgcagttcct gatctgtcat ccttggcatg tggttacttg cggaatctta
      841 cctggacact ttcaaacctc tgtcggaaca agaatcctgc acccccctta gatgctgttg
      901 agcagatcct tcctactcta gttcgactcc tacaccacaa cgatccagaa gtattagcag
      961 actcctgctg ggccatttcc tatctgactg atgggccgaa tgagcgcatc gagatggttg
     1021 tgaagaaggg agttgttccc caacttgtga agcttctagg agctactgaa ctgcccattg
     1081 tgacgccggc actgagagcc atagggaata ttgtcaccgg aacagatgaa cagactcaga
     1141 aagtgatcga tgcaggggca cttgcagtct ttcccagcct gctgacaaac cccaaaacta
     1201 atattcagaa ggaggccaca tggacaatgt cgaacattac cgccgggcgc caggaccaga
     1261 tacagcaagt ggtgaatcac ggcctcgtcc catttctcat tggtgtcctc tctaaggcag
     1321 actttaagac acagaaggaa gccgcatggg ctataaccaa ctacaccagc ggcgggactg
     1381 ttgaacagat tgtgtatctg gttcattgtg gaataataga acccttgatg aacctcttga
     1441 gtgcaaaaga taccaaaatt attcaggtta ttcttgatgc tatttcaaat atctttcagg
     1501 ctgcagagaa actaggtgag acagaaaaac tcagtataat gattgaagag tgtggaggct
     1561 tggataaaat tgaagcccta cagagccatg agaacgagtc tgtgtacaag gcctcgttga
     1621 acctaattga gaagtacttc tcagtggagg aagaggaaga tcaaaatgtg gtgccagaaa
     1681 ctacctctga aggcttcgcc ttccaagttc aggatggagc tcccgggacc tttaacttct
     1741 aatgtccagc caaagcacaa agttgttagc tatgtgctgt gctgtgctgt gttctcataa
     1801 atttgtctta ctgtttctct actaagaact ctttttaaat gtggtttgtt attgtagcac
     1861 tttttacaaa agaaactata cttgaacagt tataaactgt acatactcta tgaagctgtc
     1921 ctctgagttt atttctatgt ggaatttcgt accctgtcgt gtcctgtaaa taaagattta
     1981 agttccattc ttctttaaaa aaaaaaaaaa aaa
//
