LOCUS       XM_039082548             405 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein S20-like
            (LOC100359563), mRNA.
ACCESSION   XM_039082548
VERSION     XM_039082548.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082548.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..405
                     /gene="LOC100359563"
                     /note="ribosomal protein S20-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9 long
                     SRA reads, 24 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100359563"
                     /db_xref="RGD:2323631"
     CDS             14..373
                     /gene="LOC100359563"
                     /codon_start=1
                     /product="40S ribosomal protein S20-like"
                     /protein_id="XP_038938476.1"
                     /db_xref="GeneID:100359563"
                     /db_xref="RGD:2323631"
                     /translation="MAFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAK
                     EKNLKVKGPVHMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQIT
                     SISIEPGVEVEVTIADA"
ORIGIN      
        1 ttacgcctca gccatggcat ttaaagatac cgggaagact cccgtggagc ccgaagtggc
       61 gattcaccgg attcgaatca cgctcaccag ccgcaacgtg aagtcgctgg aaaaggtttg
      121 tgcggacttg atcagaggcg caaaggagaa gaatctgaaa gtgaaaggac cagtgcacat
      181 gcctaccaag acattgagaa tcactaccag aaaaacccct tgcggtgaag gctccaagac
      241 gtgggatcgt ttccagatga gaatccacaa gcgactcatt gacttacaca gtccttcaga
      301 gattgttaag cagattactt ccatcagtat tgagcctgga gtggaggttg aagtcaccat
      361 tgcagatgcc taagtccact gtttaaataa attgacttaa ttgtt
//
