LOCUS       XM_039100353             350 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S21-like
            (LOC100359505), mRNA.
ACCESSION   XM_039100353
VERSION     XM_039100353.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100353.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..350
                     /gene="LOC100359505"
                     /note="40S ribosomal protein S21-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 long SRA reads, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100359505"
                     /db_xref="RGD:2323689"
     CDS             52..303
                     /gene="LOC100359505"
                     /codon_start=1
                     /product="40S ribosomal protein S21-like"
                     /protein_id="XP_038956281.1"
                     /db_xref="GeneID:100359505"
                     /db_xref="RGD:2323689"
                     /translation="MQNDAGEFVDLYVLRKCSASNRIIAAKDHASIQMNVAEVDRSTG
                     RFNGHFKTYGIGGAICRMGESDDSILRLAKADGIVSKNF"
ORIGIN      
        1 ccacttcctt tctgtgttct ccgtagaccc gtgagcagaa acggcctcgg tatgcagaac
       61 gacgccggcg agtttgtgga cctgtacgtg ctgcggaaat gctccgcgag caaccgcatc
      121 attgctgcca aggaccacgc gtccatccag atgaatgtgg ccgaggttga caggagtaca
      181 ggccgattta atggtcattt taaaacctac ggcatcggcg gggccatttg caggatgggc
      241 gagtcagatg attctattct ccgattggct aaggctgatg gaattgtctc aaagaacttt
      301 tgagccagaa gaaatcggga ataatttgtt ataaataaaa gtgataataa
//
