LOCUS       NM_001131003            1253 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus similar to human chromosome 5 open reading frame
            63 (C18h5orf63), transcript variant 1, mRNA.
ACCESSION   NM_001131003
VERSION     NM_001131003.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Apr 13, 2023 this sequence version replaced NM_001131003.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM135862.1, SRR26643298.74107.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                JAXUCZ010000018.1  52640005-52640032   c
            29-154              JAXUCZ010000018.1  52638470-52638595   c
            155-255             JAXUCZ010000018.1  52638038-52638138   c
            256-373             JAXUCZ010000018.1  52626704-52626821   c
            374-430             JAXUCZ010000018.1  52623543-52623599   c
            431-1253            JAXUCZ010000018.1  52622143-52622965   c
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..1253
                     /gene="C18h5orf63"
                     /note="similar to human chromosome 5 open reading frame
                     63"
                     /db_xref="GeneID:100174910"
                     /db_xref="RGD:2299854"
     exon            1..28
                     /gene="C18h5orf63"
                     /inference="alignment:Splign:2.1.0"
     exon            29..154
                     /gene="C18h5orf63"
                     /inference="alignment:Splign:2.1.0"
     exon            155..255
                     /gene="C18h5orf63"
                     /inference="alignment:Splign:2.1.0"
     exon            256..373
                     /gene="C18h5orf63"
                     /inference="alignment:Splign:2.1.0"
     CDS             263..610
                     /gene="C18h5orf63"
                     /note="isoform 1 is encoded by transcript variant 1;
                     glutaredoxin-like protein YDR286C homolog;
                     glutaredoxin-like protein C5orf63 homolog"
                     /codon_start=1
                     /product="glutaredoxin-like protein C5orf63 homolog
                     isoform 1"
                     /protein_id="NP_001124475.1"
                     /db_xref="GeneID:100174910"
                     /db_xref="RGD:2299854"
                     /translation="MLWFQGNSLQIARSSFGLLRNLSASNTALPVLTLFTKHPCPLCD
                     EAKEVLQPYKNRFILQEVDITLPENSTWYERYKFDIPVFHLNGQFLMKHRVNTSKLET
                     QLLKLEQQVLETN"
     exon            374..430
                     /gene="C18h5orf63"
                     /inference="alignment:Splign:2.1.0"
     exon            431..1253
                     /gene="C18h5orf63"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcggcggct tgactgcctg aggctgaggc ccccaaatat tctttgtttg ctctggacca
       61 cttgacgcta cctgccagaa aaggatcaat aatgtttgtc tcttgctaga ggaatatgca
      121 gctctgtagt tttatttaga cagactattg gcagggatat acatcagagg aaaccaaaag
      181 ccagatggaa tagttcctga atgaaatttt attcctgttc gcaattattt cgaaggggga
      241 taccctctgg atcagaatta aaatgctctg gtttcaagga aatagcctgc agattgccag
      301 atcctccttt ggactcttga gaaatctctc tgcctctaac acggctctgc ctgtgctgac
      361 cttattcaca aagcacccat gccccctatg tgatgaagct aaagaagtgc tccagcctta
      421 taaaaacagg tttattttac aggaggtgga catcacactt cccgaaaatt ctacttggta
      481 tgaaaggtat aaatttgaca tccccgtctt ccatttgaat ggccagtttc tgatgaagca
      541 ccgagtaaat acctcaaagc ttgaaacaca gcttctgaaa cttgagcagc aggtgctgga
      601 gacaaactga tgtcttctga ttgatgcaag tcctcggatg aggcgtttcc ttacaggcat
      661 cctgtgaact aagaagaaca cattgtagag cgagggaagc tgtaggaatg aagaagtcta
      721 tttgttgagt caatctttcc cctttgcgac cgtggatgca cctctcctgc acgggacagt
      781 accctgatag gaagcaggct ctgcagtccg gctgccaagc agccctggaa cccaacgtca
      841 tggagtaaat gctcttacac cattaaagtg gattgtgaat tgttaatagc tgtgcatagt
      901 tgagaaaggg atgttttaat gaacacatct gcatgtagcc tatttcagtg gaatttaata
      961 atacctgttt aaaattagcg ttcacttttg ttaagtagaa tagaataatt gtcctagcca
     1021 aaaaggcttc acttcagaaa gacaaaagag gcttaaacct acagacggtg taagcagact
     1081 cagctgcacg tcatcatggg attgatttgt aatgttgagg acagcattga gttatcatcc
     1141 gttaactcaa ctaattgtaa atagtaactt tgtcaaattt ttgaatctta gaaaaattca
     1201 ttttaatcat aactgaacat atctaagcat aaagtatcat ataaagtatt aaa
//
