LOCUS       NM_001139487            1990 bp    mRNA    linear   ROD 07-OCT-2023
DEFINITION  Rattus norvegicus zinc finger protein 57 like (Znf57l), mRNA.
ACCESSION   NM_001139487
VERSION     NM_001139487.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC128765.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC128765.1, SRR8487231.74331.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..1990
                     /gene="Znf57l"
                     /note="zinc finger protein 57 like"
                     /db_xref="GeneID:100125368"
                     /db_xref="RGD:1642422"
     exon            1..108
                     /gene="Znf57l"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..1611
                     /gene="Znf57l"
                     /note="zinc finger protein 431-like; zinc finger protein
                     709-like; zinc finger protein LOC100125368"
                     /codon_start=1
                     /product="uncharacterized protein LOC100125368"
                     /protein_id="NP_001132959.1"
                     /db_xref="GeneID:100125368"
                     /db_xref="RGD:1642422"
                     /translation="MDAVTYEDVHVNFSPEEWALLDPSQKSLYKDVMVETCRNLTAIG
                     YKLEDSNIEEHCQRSRGPRRYNICHCGYEPCEHWGHGKKQCTFAHKSFLQTYERINTE
                     EKPYKCSQCSKAFANFRSLQKHEKNHTREKPYECSHCGKAFPSRSSLQIHERTHTGEK
                     PFDCSECGKAFARHSNLDIHKRTHTGEKPYDCNECGKAFSTRSHLQIHEILHTGEKPY
                     VCNQCGKAFAYRSNLEAHDKTHTGEKPYECNQCGNAYASRSSLRNHEKHHTGEKLYGC
                     NECGRAFARRSSLEIHERTHTGEKPYVCNQCGKAFARRSSLQIHERTHTGEKPYGCNQ
                     CGKAFASRTSLQNHEKHHTGEKPYGCNQCGKAFELKCDLQIHERTHTGEKPYRCNQCG
                     KAFVSRRYLRNHEKHHTLEKLYDCSQCGKSFAIFRYLQKHKKTHTGEKPYKCTHCGKA
                     FAYRSNLYRHERSHTGEKLYECNECGQAFAYYTSLHNHRKRHMGENPHECN"
     exon            109..235
                     /gene="Znf57l"
                     /inference="alignment:Splign:2.1.0"
     exon            236..296
                     /gene="Znf57l"
                     /inference="alignment:Splign:2.1.0"
     exon            297..1964
                     /gene="Znf57l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgtttgact gcgagtctga ggaaggctct agtgtgtccc gtgcgttgcg ctgagtctgg
       61 ctgctgggag ctgtgaggag agcgggcgag ctgggaatcc gcgccatgga tgcagtgacc
      121 tatgaggatg tgcatgtgaa cttctctcca gaagagtggg ctttgttgga tccttcccag
      181 aagagtctct acaaagatgt gatggtagaa acatgcagga acctcactgc tataggctac
      241 aaattggaag acagcaacat tgaagaacac tgtcaacgtt ctagaggacc cagaaggtat
      301 aacatttgtc attgtggata tgagccttgc gagcactggg gacatggcaa gaagcaatgt
      361 acctttgcac ataagagttt tcttcagaca tatgaaagaa tcaatacgga agagaagccc
      421 tataaatgca gtcaatgcag taaagccttt gcaaacttcc gtagtcttca aaaacatgaa
      481 aaaaatcata ctagagaaaa gccctatgaa tgtagtcact gtggtaaagc cttcccgagt
      541 cgcagttctc ttcaaataca tgaaagaact cacacgggag agaagccttt tgattgcagt
      601 gaatgtggta aagcatttgc acgtcacagc aatcttgata tacacaaaag aactcacaca
      661 ggagagaaac cctatgactg caatgaatgt ggtaaagcct tttcaactcg cagtcatctt
      721 caaatacatg aaatacttca cactggagag aaaccctatg tatgtaatca gtgtggtaaa
      781 gcctttgcat atcgcagtaa tcttgaagca catgataaaa cacacactgg agagaagccc
      841 tatgagtgta atcagtgtgg caatgcctat gcaagccgta gtagtcttcg aaatcatgaa
      901 aaacatcata ccggagagaa gctctatgga tgtaatgaat gtggtagagc ctttgcacgg
      961 cgcagcagtc ttgaaataca tgaaagaact cacactggag agaaacctta tgtatgtaat
     1021 caatgcggta aagcttttgc acgtcgtagc agtcttcaga tacatgaaag aactcacact
     1081 ggagagaaac cctatggatg taatcagtgt ggtaaagcct ttgcaagtcg tactagtctt
     1141 caaaatcatg aaaaacatca tactggagag aaaccgtatg gatgtaacca atgtggtaaa
     1201 gcctttgaat taaagtgtga tcttcaaata catgaaagaa ctcatactgg agagaaaccg
     1261 tacagatgta atcaatgtgg taaagccttt gtaagtcgtc gttatcttcg aaatcatgaa
     1321 aaacaccata ctcttgagaa actctatgat tgtagtcaat gtggtaaatc ctttgcaatt
     1381 ttcaggtatc ttcaaaaaca caaaaaaact cacactggag agaaaccata taagtgcact
     1441 cattgtggta aagccttcgc ctatcgcagt aatctttata gacatgaaag aagtcatact
     1501 ggagagaaac tgtatgaatg taatgaatgt ggtcaagcct ttgcgtatta cactagtctt
     1561 cataatcaca gaaagcgtca tatgggagag aacccccacg agtgtaactg atgcagtaaa
     1621 gctttgtcac atcagcgtaa tcttcagttc atcacagaac tcacactgga gagaaaccct
     1681 atgatgaagt cagtgcgata atgcctctgc atcttagagt cttcttcaaa ggcatgaaag
     1741 aattcctatg gagagcaaca ccatggatct aatacatgca gtaagggctt gaacaccaag
     1801 cacttttctt ttggtcacta agccatctca ctggtgctca tgtataatta atagaaccat
     1861 ttcatcatta aaatattgtc ttgttttcaa gttgcataca acttatcatc caaggataga
     1921 ggaacataca atagttgaat aataaaactt tttgcaaatg aaaaaaaaaa aaaaaaaaaa
     1981 aaaaaaaaaa
//
