LOCUS       XM_039084810            3748 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus L3MBTL histone methyl-lysine binding
            protein 4 (L3mbtl4), transcript variant X1, mRNA.
ACCESSION   XM_039084810
VERSION     XM_039084810.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084810.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3748
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3748
                     /gene="L3mbtl4"
                     /note="L3MBTL histone methyl-lysine binding protein 4;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:103690158"
                     /db_xref="RGD:1587524"
     CDS             555..2396
                     /gene="L3mbtl4"
                     /codon_start=1
                     /product="lethal(3)malignant brain tumor-like protein 4
                     isoform X1"
                     /protein_id="XP_038940738.1"
                     /db_xref="GeneID:103690158"
                     /db_xref="RGD:1587524"
                     /translation="MRQPNRKRKLSMASTEHMNQDGRMGQTEEETKPGDGATPSGRES
                     SVTTQETWSWEQYLREGNAVAAPVELFSKDQSFPEHENGFQVGMRLEGIDARRPSVFC
                     VLSVAEVCGYRLRLHFDGYLSCYDFWTNAGSPDIHPVGWCQKTKHELHIPRDYRKDKF
                     VWMDYLKACRLQNAPKKLFRNRSSNGPVPKEFQVGMKVEAVDRRNPCLMCVATVADIV
                     EDRVRVHSDSWDDSFDYWCDVSSPCIQPVGWCQENGRNLVTPPGYPGPDKFSWADYLQ
                     ATQAKAVPAKAFNTRAPHGFLPNLKLEAVDKRNPRLIRVATVTDVDDYRVKIHFDGWD
                     HKYDYWMDADSQDIHPIGWCDVTGHPLEVPYGSEHVKILPGQPSCPTPGCRGIGHIRG
                     PRYAGHHSAFGCPYSDVNLKREAALQDRLREQTQANLEFDPSHSKSENLCNLNFNGKC
                     EEVDSECRLVQQAKCLKIKGREDTDLDNLFREYSASQVQQMLHQPLSMTSMSAHPFRD
                     LPLGREQHCKLLPGVADIQASEVARWTVDEVAEFVQSLLGCEEHAKCFKKEQIDGKAF
                     LLLTQADIVKVMRIKLGPALKIYNSILMFRNSQDVTEDTASGQEARR"
ORIGIN      
        1 gaagtggaaa actaactgtg aaaaaaaatt gaacatgaaa gctgatttga atttttttct
       61 agagatggtg aggaatctag aatctgacag tggccttgcc tcaaagcgct ttatctggga
      121 acagtctgtc tttcgacaag ttgcttccag aacactctga ggaactggca catgctgttg
      181 ctatcatgca gagggtgaga taagagcatg ctgggaactg tcttgtattc agccttcagg
      241 aaactttagc aagattgtct catttggtag aagtcatgtg taccaactag cagtcttccc
      301 tgggaccaga ggagagagca gccctgaaca aagcagattt ctctgctctc acatacccgg
      361 gtgctgcgaa cctggtctca gctccagctc acagtttcca gaaagagcac actgtccaag
      421 caggcaagac tttgggagag agtttcctca gagtccagtt aagtttgaga tggtggctag
      481 aggcttgtga gcttcctctt ggcctccaca gtgactgctt atagaaaaca ctgctaagga
      541 actctgaagt ggagatgaga cagcctaaca ggaagaggaa gctcagcatg gcgtccacag
      601 agcacatgaa tcaggacgga cgcatggggc aaactgaaga agaaacgaag ccgggagatg
      661 gggccacacc ttcaggccga gaatcttctg tgaccacaca ggaaacctgg tcctgggagc
      721 agtacttgag agaagggaat gctgtggccg cacccgtaga actgttttcc aaggatcagt
      781 ccttcccgga gcatgaaaat ggctttcagg ttggaatgag attggaaggc attgatgccc
      841 gacgtccgtc tgtgttctgc gtgctttctg tagctgaggt gtgtggttac cggctgagac
      901 tgcattttga tggttattta agctgctatg atttttggac caatgctggt tcccccgaca
      961 ttcacccagt gggatggtgt caaaagacca agcatgaact acatatccct cgagattata
     1021 gaaaagataa atttgtttgg atggattact tgaaggcctg tagattgcaa aatgctccta
     1081 agaaattatt cagaaacaga agttctaatg gtccagtgcc aaaggagttt caggttggga
     1141 tgaaggtgga ggcagtggac aggaggaacc cttgcctgat gtgtgtggcc actgtggcag
     1201 acatcgtgga agaccgtgta cgggtgcatt ctgacagctg ggacgatagc tttgattact
     1261 ggtgcgatgt tagcagtcct tgtatccagc cagttggttg gtgtcaggag aatggaagaa
     1321 atctggtcac acccccaggt tatcctggtc cagataagtt ttcctgggca gactacctgc
     1381 aagctactca agcaaaggca gtccccgcca aggcctttaa cacgagggct ccacacgggt
     1441 ttttgccaaa cctgaagttg gaagctgtgg acaaacggaa cccccggcta atccgcgtcg
     1501 ctaccgttac agacgttgat gactacagag taaagattca cttcgatggc tgggaccaca
     1561 agtatgacta ttggatggat gccgacagtc aggacatcca ccccattggg tggtgcgatg
     1621 tgacagggca tccgctggaa gtgccatatg ggtcagagca tgtgaagatc cttccaggtc
     1681 aaccttcatg ccctactcct gggtgccgag ggataggaca catccgaggt ccgcgttatg
     1741 caggacacca cagtgctttt ggatgcccat actcagatgt gaacttgaaa agggaggcag
     1801 cgcttcagga tcgcctgaga gaacaaacgc aggcaaatct ggaatttgat ccttcacatt
     1861 ccaaatcaga aaacctctgt aatttgaatt tcaatggaaa atgtgaagaa gtggacagtg
     1921 aatgcagact tgtacagcag gcaaagtgtt tgaaaatcaa aggaagagaa gatactgact
     1981 tggataatct cttcagagag tactcagctt cgcaggtgca gcagatgctt caccaaccgc
     2041 tctccatgac atccatgtct gcccaccctt tccgagacct ccccctcggc agggagcagc
     2101 actgcaaact gctcccaggt gtggctgaca tccaagccag tgaagtggcc agatggacag
     2161 tggatgaggt ggctgagttc gtacagtctc ttctgggctg tgaagaacat gccaagtgct
     2221 tcaagaagga gcagatagat ggcaaggcct tcctgcttct aacccaggca gatattgtca
     2281 aagtgatgag aatcaaactg ggcccagcac tgaagattta caattctatc ctgatgttta
     2341 ggaactccca ggatgtcact gaagacactg cctctggcca agaagccagg agataaatgt
     2401 gctcctgaac atccactgac agcaggactt gcgcttttgg gaacatggtt ggcagtcatc
     2461 cattcgaatc taatgtcccc atggtcatac caatatttaa tctggaccca ttaaagtatc
     2521 tggtttctgc atatggcaga ctttgataaa tgaccaagtg ccagtgagtt ggatgcttag
     2581 ttaggtccaa gtgtgggttt gggtggcatc cttatgcttg gcgtgctgca gcaaacagac
     2641 cgaggaagcc actgtgtgca tctctaccct cccttctaaa agaaaacact tcccattctg
     2701 caagtgtgtc tcacgtggta aaatgccagg aaaccgattc attaatgcat cattaataca
     2761 tgcaccagaa ctacatctga acacagcttg catctgtcat ctgggagcct tgagtggaag
     2821 agataggatc ctggcgctca cacgaagact aacgaggttt ctgggtcctt aaaactcagg
     2881 aaagtgaatc ttgttaaaag tgctaatata agcacattgt ttccgtgatc catgaattgg
     2941 catttttatt ccttaccatt ccttggttgt ggttccaaag tgccctggag cacacttcaa
     3001 ggagtgtgcc tagaggtaac aggagtggtt ggaggccatt ccaggaacct gctgggacac
     3061 tcctgagcat ttgcagtcag ggatatctct cccagacact tggcattggt caaagatcca
     3121 cctgcatgaa attcctccag ctcccaccct ggtgaaactt cagatggact ctcccctcat
     3181 ctgttgatga ttaaaaaaac aatcaggtct gatttcacct ctccagaggt atggcagcag
     3241 gacaagaaaa cctccacaga ggagctcaga atctgttgac tgtggcattc gagttgtggg
     3301 aagaccactt cctagttgcg aataattaga accccaagtc tacaactctt tgtccttttt
     3361 cgtgtggtag caatggcagc tatcttcctg gaaacaaagg tccactggct catccatcag
     3421 gtgtggggat caaaatggaa gccacaagaa aaatgcagac ctgacaatat ctttctgcta
     3481 cattgagaat gttctcaact taacaaagtt gattctgctt agagaatgtc tctaacttta
     3541 ggtcactgaa aaagaaaaat atcttgaaga gaaatcttta agtgctttaa aggtaaattt
     3601 gatatggaat aaagaatcac agcttctact gtctgtggtg ttttgtttgt tggagtattt
     3661 tggtagactt ttatatggaa taaagaattg ctgcttctac tgttaaagtt gtaacatatt
     3721 ttaaatgtta ataaaacgtg aaagtaga
//
