LOCUS       XM_039098996            5243 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus L3MBTL histone methyl-lysine binding
            protein 3 (L3mbtl3), transcript variant X6, mRNA.
ACCESSION   XM_039098996
VERSION     XM_039098996.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098996.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5243
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5243
                     /gene="L3mbtl3"
                     /note="L3MBTL histone methyl-lysine binding protein 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 31 ESTs, 3 long SRA reads, 14 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:309550"
                     /db_xref="RGD:1305474"
     CDS             986..3592
                     /gene="L3mbtl3"
                     /codon_start=1
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X1"
                     /protein_id="XP_038954924.1"
                     /db_xref="GeneID:309550"
                     /db_xref="RGD:1305474"
                     /translation="MTESSSTTSGQEFDVFSVMDWKDGVGTLPGSDLKFRVNEFGALE
                     VITDESEMESVKKATATTTWMVPTAQDAPPSPLSSRPAFPPAYWTSPPGCPTVFSEKT
                     GVPFRLKEQSKVDGLQFCENCCQYGNGEECLSGGNYCSQNCSRRARDKDQKEDRDGGE
                     DNDEEDPKCSRKKKPKLSLKADSKEDEERDDEMENKQDGRILRGSQRARRKRRGDSAV
                     LKQGLPPKGKKTWCWASYLEEEKAVAVPTKLFKEHQSFPYNKNGFKVGMKLEGVDPEH
                     QSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLRPPKGY
                     KEEEFNWQSYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSPSIICVATV
                     TDMVDNRFLVHFDNWDESYDYWCESNSPHIHPVGWCKEHRRTLITPPGYSHVKHFSWD
                     KYLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPLFIRVATVADTDDHRIKVHF
                     DGWSSCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCRGVG
                     HFKKSRYLGTQSGANCPYSEINLSKDRIFPDRLSGEITPSSFSFPRSKRTDTNESSSS
                     PETRDQHANNVKEDSEKKKENEVKTSAEAKVVREEPTPSVQQTQPPQQALKAPQAPQI
                     QPAQQAPQAPQAQPTQQQAQQAQQAPQAPQAQPAPQAPQTHPTQQQAQQAQPTQQQAQ
                     QAQPTQQQQAQQQAQRRSAVFLSFKPPIPCLPLRWEQQSKLLPTVAGIPASRVSKWST
                     DEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIFNSILM
                     FKAAEKNSHNEL"
ORIGIN      
        1 ttcattgatt ttttttctcg gtgaggatga aagttctgag accgagagag ggaaggaagc
       61 gcaccctcgt cttgggaaag agatcagggg aggggaagga gagaaggggt ttctccccca
      121 cttctctgcg cctctgggaa agaggagaaa acttaatccc ggggaaaaaa gtgggcaagt
      181 gactcggaag cggctggagg gggagtctgt gggcatctca ctctgaagta gtgagtgcga
      241 gtgcgaaaga ggaacaaaag agcgagaaaa gagaaaggaa aaaatggggg ggaggagaga
      301 cttgtatttt ttttctcctt tgcgcgcaca cggggaaggg tgtggggggc cgtgcggaag
      361 ggagcgggcc gaggcggccg cgtcgggcgg tcgccggcgc gcaggcggcg ggatgcgtgt
      421 gggccccctc ccccgcgccc ccccgagctt gtcactttgg tcgctttttt gacaccgggc
      481 gcggggtggc ggcggtgggg ggagaagcgc ggcaccgcgg ggctgcgtgt ccggggcggc
      541 gctggggggg aatcgcggcg gagccgcagc ctccccgggg gcaccgagcg cggtcggcct
      601 gaggctaagg agggaggggg cggcttcggg aggggaccgc gggcacgatc ggtgcggcgg
      661 cgggaggacg cgagcaccgg cgcgccgccc ctgcggcccc ctccgcccgt gtggcctttg
      721 tgccgggcgc gcaccggatc cttaaaagaa gtcttggggg tacacagcag ttctgaaggc
      781 caccaggcag ttccgtcttt cttcaccacg gcctcgagcg ttcagagcag ttgagaataa
      841 gctcggtgac taagagcctt gcctggagca tggtcaggcc tggccatgcg tgcctgcccc
      901 tcagctcatg gcaggatcat gtcttcgtgg aaggaacaac taggaaccgt caccacaact
      961 tcaactgttg gctaccaggt aaatcatgac tgaatcttca tctaccacaa gtggtcaaga
     1021 gtttgatgtg ttcagtgtta tggactggaa ggatggcgtt ggtaccctac caggaagtga
     1081 tttgaagttt agggtaaatg aattcggagc tttggaagtt atcacagacg aaagcgagat
     1141 ggaaagtgtg aagaaagcaa cagccactac cacgtggatg gtcccaactg ctcaggacgc
     1201 cccgccctct cccctgagct ccaggcccgc atttccacct gcctactgga catctccacc
     1261 cggatgtccc acagtctttt cagagaagac tggggtaccc ttcaggctga aggagcagtc
     1321 gaaagtagat gggctccagt tttgtgagaa ctgttgtcag tatggcaacg gagaggagtg
     1381 tctttctgga gggaactatt gcagccagaa ctgttcacgg cgtgccagag acaaagatca
     1441 gaaggaagac cgagatggag gcgaggacaa tgacgaggag gatcctaagt gtagtcggaa
     1501 gaaaaaacca aaattatctc tgaaggctga ctccaaggaa gatgaagaga gagatgatga
     1561 aatggagaac aaacaagatg gaaggatcct gaggggttct cagagagcca gaaggaaaag
     1621 acgtggggat tcagccgtct taaagcaggg cttgcctcct aaaggcaaga aaacctggtg
     1681 ctgggcatcc tacctagagg aggagaaagc tgtggcagtg ccgacgaagc tgttcaaaga
     1741 gcaccagtcc ttcccataca acaaaaatgg attcaaagtc ggcatgaagc tagaaggtgt
     1801 ggaccctgag caccagtctg tgtactgtgt cctcactgtg gctgaggttt gtggatatag
     1861 gataaagctt cactttgatg gatattctga ctgctacgac ttctgggtaa acgccgatgc
     1921 tttggacatt caccccgtgg gctggtgtga gaagactggt cataagctcc gccctcctaa
     1981 aggctataaa gaagaagaat ttaattggca gtcctacctt aagacgtgca aagcccaggc
     2041 tgctcccaag tcattatttg aaaatcagaa cataacagtg atcccgtcag gttttcgagt
     2101 tggaatgaag ctcgaggctg cagacaaaaa gagtccttcc attatctgcg ttgctacggt
     2161 aacagatatg gtggacaacc gtttcctggt ccattttgac aactgggacg agagctatga
     2221 ctattggtgc gaatcaaaca gcccacatat tcatccagtc ggatggtgta aagaacacag
     2281 aagaacactg attacaccac caggctattc gcatgtgaaa cacttttcct gggataaata
     2341 tctagaagag accaattctt tacctgctcc tgcaagagct ttcaaagtga aacctccaca
     2401 tggattccag aaaaaaatga agcttgaggc tgtggacaaa agaaacccac tgttcatcag
     2461 agtagcaacg gtagcagaca cggatgatca ccggataaaa gttcactttg atggctggag
     2521 cagttgctat gactactgga ttgacgcaga ctctccggat attcaccctg taggctggtg
     2581 ttccaagacc ggacaccctc ttcaggctcc gctaagccct gcagaattaa tggaaccgtc
     2641 agaaactggg ggctgtccaa ccctaggctg taggggagtt ggtcatttta aaaaatcgag
     2701 gtacctgggc actcagagtg gtgccaactg tccctattca gaaatcaact tgagtaaaga
     2761 ccgcatcttc cccgaccgtc taagtggtga gataacccca tccagtttct cattcccaag
     2821 aagtaaaagg acagacacca atgaaagttc atcatccccg gaaaccaggg accagcatgc
     2881 caataatgtc aaagaagatt ctgaaaagaa aaaagaaaat gaagtaaaga catcagccga
     2941 agccaaagtt gttcgggaag agcctacccc cagcgtacag cagactcagc cacctcagca
     3001 ggcactaaag gctccgcaag ctccacagat ccagccagcc cagcaggccc cacaggcacc
     3061 gcaggctcag ccaacccagc agcaggccca gcaggctcag caggccccac aggcaccgca
     3121 ggcccagccg gccccacagg ccccgcagac ccatccaacc cagcagcagg cccaacaggc
     3181 ccagccaacc cagcagcagg cccagcaggc ccagccaacc cagcagcagc aggcccagca
     3241 gcaggcccag aggcgctcag ctgtatttct ctcctttaag cctccaattc catgtctgcc
     3301 cctgcgctgg gagcaacaga gcaagcttct tccaactgtt gctgggatcc cggcgagtcg
     3361 agtttccaag tggagcacag acgaggtgtc agaattcatt cagagtttgc ccggatgtga
     3421 agaacatgga aaggtgttta aggatgaaca aattgatgga gaagcatttt tactgatgac
     3481 ccagacagac attgttaaaa ttatgagcat taagctgggc ccagctctca aaattttcaa
     3541 ttctattctg atgttcaaag ccgcggagaa gaattcccac aacgaactgt gaagacggtg
     3601 aattctggca ccatcggctt ctgctttata gctcattatg ttctttcaaa gcacaaggac
     3661 agctccggct ctggagtgag gagtcttcgg aattcccagg ggcagcacta cagggcccat
     3721 gggtccctcc agctgcagac acattcttag ggaatgccca agcttcttac cagcaactgg
     3781 ccaacagcag tcacctttgg ttccgctcac cgagctaaac ttaacctttg taaatttttt
     3841 ggatgtggga ggagggtggg gagagggagg cttcgttatt tatggatggg gcaaaaatca
     3901 gaacttttgg cattttgtaa acattgtcgg agtctctttc atgtacactt tctttttttt
     3961 ttttttttca atattttcag aaaccttttt atataacgga atctcaacct aaaccaaatc
     4021 ctttgaacct ggctgggttt agcctgggac tcgtgtcagt catgttcacc ctgtgccata
     4081 tttggaattg cagcattagc caagtgtaac gttgtgagtc gtgatattgc ctaactgtgt
     4141 caacctctgt tgggactgaa gaattgtaaa tactaccttt ccttgaatcc atgtttttac
     4201 ttttgcacgc atcatgaatt gttaaacaaa gtacttttca ccagcatctt tactgttatt
     4261 attaccaaaa agatgtatat aaaagaatgg aactgaagag taaaatatat aaacctactt
     4321 agatttgaag gaggtagcgt atctggacag aattggtttg gtacgtcatg gtgcccatgt
     4381 tcccagcagt tggcattgga ggattgtgca gtttcatatc ccaagggata ttgacgagga
     4441 atttgatttg tgaagttact gtgtgcatct atgtacatga catggaagtg gctggtgctt
     4501 tactgaaaag gactcacttg tctggaaaca ctaatccttc aagagctccc atccgtccta
     4561 catgtcctcc agacccagag gatttgctca gagtgagctg agaagcagag caagggtctc
     4621 actgcacaga cttggtgtga ctgtcacatc tgcagataca gaattctctt cgctcacaga
     4681 tcgagaaagt ggttcccaaa gccattcttc ggaaacctcc aatggtgaaa gatacctttt
     4741 cctaaaaaaa tattttgcct tgatttctaa gtatctggat gcactttaaa tgaaagccca
     4801 tggttattta taaactcata gctggcagtg tttcttttgt aagcgtgcac ttctaagggg
     4861 aaggtaagat attttgtcag tctttggatg tattttctaa tcccacgatt agacatttac
     4921 tcaaggactg gtttaaaaat agaaagttta gtagcatgct gtcggaactc tgggggaagg
     4981 tcccacctct tcccatgaac tctttaatgt ttttctgatg taggacttcc tttgatgtgc
     5041 catagtagga gtcctttgca tttgtcatga ttcaaggtaa acagggtccg tgacatctgc
     5101 aatgtcctct tcatttcttt gcatgaatct gctaaatgag ctttttattg ttactccccc
     5161 tccccctttg ttgtggtcag tatttgtaca ttaacttgca cttgttacat gtgatatgaa
     5221 tgaaataaaa tcttaattgc aga
//
