LOCUS       XM_039106721            5244 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus L3MBTL histone methyl-lysine binding
            protein 1 (L3mbtl1), transcript variant X6, mRNA.
ACCESSION   XM_039106721
VERSION     XM_039106721.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106721.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5244
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5244
                     /gene="L3mbtl1"
                     /gene_synonym="L3mbtl; RGD1307316"
                     /note="L3MBTL histone methyl-lysine binding protein 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 10 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:311613"
                     /db_xref="RGD:1307316"
     CDS             313..2820
                     /gene="L3mbtl1"
                     /gene_synonym="L3mbtl; RGD1307316"
                     /codon_start=1
                     /product="lethal(3)malignant brain tumor-like protein 1
                     isoform X5"
                     /protein_id="XP_038962649.1"
                     /db_xref="GeneID:311613"
                     /db_xref="RGD:1307316"
                     /translation="MEGHSDMEIIRAVKGSATGEINVHLVARDSAGSHPHLPTTTFII
                     PTNAATLGLPSTALDVSYPREPVHVGAAERVAGSEPVTATILPQLSTGPGTNSTVRLL
                     DWTGVSAPLAGSGMRPSELGPASQFRINEYATQNMIEIERPRSPEQRHEGGTAGREAD
                     IQHPDVHKDPQEVIPQEPSVDAGSCKCQTCGPQQSIGLDVGSSGDRCPQPFQKRSVIV
                     ENSGCTVASELIKPMKKRKHKEYQSPSEESEPEAMKQGKGKDPDREPTPGTSENEEWS
                     RSQLVSSEKKEGWSWESYLEEQKAVTAPVSLFQDSQAVTHNKNGFKLGMKLEGVDPQH
                     PSMYFVLTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGY
                     KEEEFSWSQYLRSTKAQAAPKHLFVSQSHSPPPVGFQVGMKLEAVDRMNPSLVCVASV
                     TDVVASRFLVHFDDWDDTYDYWCDASSPYIHPVGWCQKQGKPLTPPQDYPDPDSFCWE
                     KYLEETGTSAVPTWAFKVRPPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKLHF
                     DGWSHNYDFWIDADHPDIHPAGWCSKTGHPLEPPLRPRESSSASPGGCPPLSHRSPPH
                     TKTSKYSFHHRKCPTPGCDGSGHVTGKFTAHHCLSGCPLAERNQSRLKAELSDSETTA
                     RKKNQSNLSPRKKPRHQGRIGRPPKYRKMPDEDFQALPPSVVHQSLFMSTLPTHADRP
                     LSVCWEQHCKLLPGVAGISASAVSKWTIEEVFGFVQTLTGSEDQARLFKEEMIDGEAF
                     LLLTQADIVKIMSVKLGPALKIYNAILMFKNNDDVFK"
ORIGIN      
        1 agaggagagg agaggagagg agaggagagg agaggagagg agaggagagg agaggagaga
       61 ggagagagag tgagtgagtg ttagttcaga aatggtttat tgagcatctg ctatgtgcca
      121 accactcttg ttttaggtag gattccctgg aatcacagac taggtttatg agagtagcct
      181 tgtgaaacca gcaagattgg gcagagatgg tgaaatgctg acctagtccc ggcagaggcc
      241 tcagcctggg gagcaggaag ccctgaacct gatatggccc tgcagagacc cctcaaatga
      301 agacgcaacc agatggaggg gcacagtgac atggaaataa taagggcagt gaaagggtct
      361 gccacggggg agatcaacgt acacctggtg gccagagaca gcgcgggttc ccaccctcac
      421 ctgcctacaa ccaccttcat cattcctacc aatgcagcta cccttggtct gcctagcact
      481 gccctggatg tgtcctaccc ccgggagcca gtccacgtgg gcgcagcgga gcgagtggct
      541 ggcagcgaac ccgtcacagc caccattctg ccacagctga gcaccggacc agggaccaat
      601 agcacagtca ggcttctgga ctggacaggg gtttctgcac ctttagctgg gagcggcatg
      661 aggccctcag aacttggtcc tgcatcccag ttccggataa acgagtacgc gacacagaac
      721 atgatcgaaa tagagcggcc acgaagccca gagcagcgac atgagggtgg cacggctgga
      781 agagaagcag acatccagca ccctgatgtt cacaaggacc ctcaagaagt cattcctcag
      841 gaaccttcag tagacgcagg ttcttgcaag tgccagactt gtgggcccca acaaagtatt
      901 ggtctagacg ttggttcatc cggagaccgg tgtcctcagc ctttccagaa gcggtcagtc
      961 atagttgaga actcaggctg taccgtcgct tctgagctga taaaacccat gaaaaagagg
     1021 aaacataagg agtatcagag cccgtcagag gagtccgagc cggaggccat gaagcaagga
     1081 aaaggaaaag acccagacag agagcccacc ccgggcacct cagagaatga ggagtggagc
     1141 agaagccagc tggtgtccag tgagaagaag gaaggctggt cctgggagtc ctacctggag
     1201 gagcagaagg cagtcacggc cccagttagc ctcttccagg actcccaggc agtcacccat
     1261 aacaagaatg gcttcaaact gggcatgaag ctagagggcg ttgaccccca acacccgtcc
     1321 atgtacttcg tcctcactgt ggctgaggtg tgtggctacc gcctgcgtct gcactttgat
     1381 ggctactctg agtgccatga cttctgggtc aatgccaact ccccggacat tcatcctgcc
     1441 ggctggtttg agaagactgg acacaagctg cagcctccca aaggttacaa ggaggaggag
     1501 ttcagctgga gccagtacct gcgcagcacg aaagctcagg cagcccccaa gcatctgttt
     1561 gtgagccaga gccacagtcc tccgccggtg ggcttccagg tgggcatgaa gctagaagct
     1621 gtggaccgca tgaacccatc cctcgtgtgt gtggccagcg tgaccgatgt ggtggccagc
     1681 cgcttcctgg tgcactttga tgactgggac gatacttatg actactggtg tgatgccagc
     1741 agcccctaca tccacccagt aggctggtgc cagaagcaag gaaagcccct tacccctcca
     1801 caagactacc cagaccctga cagcttctgc tgggagaaat atctagaaga aactgggacc
     1861 tcagctgtgc ccacttgggc cttcaaagtg cgaccccctc acagcttcct ggtcaacatg
     1921 aagctggagg ctgtagaccg ccggaaccca gcactgattc gggtagccag tgtggaggat
     1981 gtggaggatc accggataaa gctccacttt gatggctgga gtcacaacta tgatttctgg
     2041 attgatgctg atcacccgga catccatcct gcaggctggt gctccaagac aggacatccc
     2101 ctggagcctc ctctccggcc cagagagtcc agctctgcct cccctggggg atgcccccct
     2161 ctcagccaca ggagcccacc ccacacaaag acctccaagt atagctttca ccaccggaag
     2221 tgccccactc ctggctgtga cggctccggc catgtcactg gtaagttcac agctcatcac
     2281 tgcctctctg gctgcccact ggctgagagg aaccagagcc ggctgaaagc ggagctgtcc
     2341 gactcagaga ccacagccag gaagaagaac cagtctaatt tgtccccaag gaaaaagcct
     2401 cgccatcaag gccggattgg acgccctcca aagtatcgca agatgccaga tgaagatttc
     2461 caagccctcc ctcccagtgt ggtacaccag tccctcttca tgtccacctt gccgacccac
     2521 gctgatcgcc cactgtctgt gtgctgggag caacactgca agctgttgcc aggagtggca
     2581 ggcatctcag cctccgcagt ctccaagtgg accatcgaag aggtctttgg cttcgttcag
     2641 accttgacgg gctctgagga ccaagcgcgc ctcttcaaag aggagatgat tgacggcgag
     2701 gccttccttt tgctgacaca ggcggatatt gtgaagatca tgagtgtcaa gctgggccca
     2761 gctttgaaga tctataatgc cattctcatg ttcaaaaaca atgacgatgt ctttaagtga
     2821 ctgactgggg ggggggggca gtgtggaatg ctcctcccac cctcgctggg ctccctctgc
     2881 agatggtgct tctctcccaa cttgagttct gcacccctgc cctcactgtc tgactaggtg
     2941 tacgggagca gaggcgccca gggaagaggg tctaagtcct cagtcctgga gttcatttgt
     3001 ctccagttgc cccagggagg gtgtgactaa actgaggcct gactgacaga aagggctgca
     3061 cgtatcctga ctagggcagc caccttggtt atcgtcttag gaagtagaaa gacatggtag
     3121 gcagtctcta ttcagaccta tgtccttctt ggcatctcga tgccctttct cctcctcgga
     3181 ccctctcttc ctattaagaa gtgaccatga ccttggcata catatttaca catgaaaggt
     3241 gcctcctccc tttctgctgg tagctatgta cccttgctcc ccattcatgg tccagccagg
     3301 ccccatggct cttcccctgt agatgcttaa gtctcagaaa tatgggaact tcctactagg
     3361 agcctctggc tgtctaggca gagattcaga accaaggcac cttcctgaac acattcagtt
     3421 caggatcact gagcactgaa gtgggcatac ggagtgagca gatggttaaa gcccctgtca
     3481 taacaagcag ggtctaagtc ccctgatgct ttctctgttg ggtgtgggga gaagcctggc
     3541 ctgactagca gtccaggcta ggatatcgtc agacacatcg gcgtctttga cctgaagagt
     3601 agctccagaa agcacgacag cagcatcctt ctctctgtgt ctgtggatct cagccaagat
     3661 atcacacatg agggagagtc ccctgccagc ccagcctgcc agtagagtgt agccgtccag
     3721 catacaaccc ctgtgacatc acgtccactc tgtcccttaa acgtttttca ttttgctctt
     3781 aagactaaca aaggccactt acagtagaaa gttggaaagg tcccctctcc tggcctttcc
     3841 tgccagtctc caacagtctc tcactgccag ctaggttcct gctggggctc taggacttgg
     3901 acctttccgt ccgagtagag attcagcctc tgctcaatta ctgccaaacc cgcctcccag
     3961 cctaagcggg gagtgccaga gcccaatagg tgggaaccag tgccaagcat catctggtgc
     4021 tgaggtgggc ccgcaggctg aagagcaggg tcgtccccca gtctggtata cttctaagtc
     4081 gtggtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     4141 tgtgtacagg tgttggtcat tccgcagtgt ctgtcaggtg cagtgttggg actattaagg
     4201 gcgactgtta aactgtgagg ctttattatt tcctcagaaa tgggaagcca aaagtccttt
     4261 ctccagtgct ttggggacct ccccgcccta agccagacag cttctgggga acagcccagt
     4321 ggcacccagc tagtctggca gaggctcaga tttcctttcc ctctcagccc tcgggggtaa
     4381 ctgagctctg agcataatcc ttctaggagg gcaccggaca aggctggcca agtggggtgg
     4441 gtgacagatg tgacaccact gcccctttgc cactctctct ccaatctcag ttgtctgggc
     4501 tgcggtggaa cctaccaccc cctggccttt agtctgcccg ccacactctg acgggtctga
     4561 ggcagcaagc gttctgtgtt ctttggctgg tgctgtgaca ctacacagct cccgaggaag
     4621 ggactgttca gctctgccag tgatgaccgc ctgtgggaaa gaccagacgg actgacggcc
     4681 gtggagaaga cgactcaccc cttccacaat aataccagaa accaaatctt aaaaagtcaa
     4741 acctgccgtc cgaccatccc ccacccatcc acgacactgg gtccccagac gagaccattg
     4801 caccttaacc tgggcgcgca ggcagtgggt ggctgtttct ggcccttgta ccctgaccac
     4861 tagcaacagg aactactcac cctttgtcct caacaggctt gtcccgcctc ggcccagccc
     4921 tggcctagga cagagatgaa ctctgtttaa tttccaaggc agagagaatg gttccagagt
     4981 ctgacaatga aacctgtttg caaattcatt cacacgcacc gtgacacggg gttacatttt
     5041 ttttttactt acactgtgcg cgtatgtctc tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     5101 tgctctcaag tgtacattct taaagaaaat cctctggttt gaactaaagt aactcttgag
     5161 agaggaaaca gtacaaagaa aatatagtga gatttgtctg tgtattgaaa caacacaaaa
     5221 aaataaatgg ttgaccagtc tgta
//
