LOCUS       NM_001109674             963 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus keratinocyte associated protein 3 (Krtcap3),
            mRNA.
ACCESSION   NM_001109674 XM_001068323
VERSION     NM_001109674.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 963)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001068323.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100633.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..963
                     /gene="Krtcap3"
                     /note="keratinocyte associated protein 3"
                     /db_xref="GeneID:683980"
                     /db_xref="RGD:1596516"
     exon            1..150
                     /gene="Krtcap3"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..845
                     /gene="Krtcap3"
                     /note="KCP-3"
                     /codon_start=1
                     /product="keratinocyte-associated protein 3"
                     /protein_id="NP_001103144.1"
                     /db_xref="GeneID:683980"
                     /db_xref="RGD:1596516"
                     /translation="MRCCRVCAFDAARGPRRLMRVGLALILVGHVNLLVGAVLHGTVL
                     RHVANPRGAVTPEYTTANVISVGSGLLSVTVGLVALLASRNLLLPRLHWALLTLALVN
                     LLLSAACSMGLLLAVSLTIANGGRRLIADCHPGLMDHSIPLDQGPGHTDCPFDPTRIY
                     DTALALWIPSLFMSAAEAVLSGYCCVAALTLRGIGPFRKEGLQGQLEELTELEPLECK
                     RQENIQLLHHHQDFQALQKTWV"
     exon            151..335
                     /gene="Krtcap3"
                     /inference="alignment:Splign:2.1.0"
     exon            336..395
                     /gene="Krtcap3"
                     /inference="alignment:Splign:2.1.0"
     exon            396..602
                     /gene="Krtcap3"
                     /inference="alignment:Splign:2.1.0"
     exon            603..737
                     /gene="Krtcap3"
                     /inference="alignment:Splign:2.1.0"
     exon            738..850
                     /gene="Krtcap3"
                     /inference="alignment:Splign:2.1.0"
     exon            851..963
                     /gene="Krtcap3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctacggcag cgcggaagcc ggccttcggg tcgggtcggg tcgggtcgga tcggatcggg
       61 tcgggtccgg gcgaagccag ttcccggtag agcagcctgg cggagggggc agagcggcca
      121 cgatgaggtg ctgccgcgtc tgcgccttcg atgccgcccg agggccccgg cggctgatgc
      181 gcgtgggact tgcgctgatc ctggtgggcc acgtgaatct cctagtggga gctgtgctgc
      241 atggtactgt cctgcggcac gtggccaacc cccgtggcgc ggtcactcct gagtacacca
      301 cagccaatgt catttctgtg ggttcgggac tactgagcgt taccgtggga cttgtggccc
      361 ttttggcatc caggaacctt cttctcccac gactgcactg ggccctgctg acgctggcct
      421 tggtgaacct gctcttgtct gctgcctgct ccatgggcct cctcctggct gtgtcgctca
      481 ctattgccaa tggtggccgc cgtcttattg ctgactgcca tccaggactg atggatcatt
      541 ccataccact ggaccagggg cctggacaca ctgactgccc ctttgatccc acaagaattt
      601 atgatacagc cttggctctc tggatccctt ctctgttcat gtctgcagct gaagctgttc
      661 tctctggtta ctgttgtgtg gctgcactca cgctacgggg aattgggccc ttcaggaagg
      721 aagggttgca gggacagctg gaggaactga cagagcttga acctcttgag tgtaaaaggc
      781 aggagaatat acagctgctc caccaccacc aggatttcca ggccttacag aaaacctggg
      841 tttaggacag gaggtgctcg gctgaggcgc ataccacagg tgttttctac tacgcacgcc
      901 atggggcccc aaccctaggg cgctataaat aattgtaata aaagaacttg gtttttgtct
      961 tcg
//
