LOCUS       XM_039099187             856 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus keratin associated protein 10-8
            (Krtap10-8), transcript variant X1, mRNA.
ACCESSION   XM_039099187
VERSION     XM_039099187.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099187.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..856
                     /gene="Krtap10-8"
                     /note="keratin associated protein 10-8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins, and 69% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:686720"
                     /db_xref="RGD:1593740"
     CDS             1..753
                     /gene="Krtap10-8"
                     /codon_start=1
                     /product="keratin-associated protein 10-1-like isoform X1"
                     /protein_id="XP_038955115.1"
                     /db_xref="GeneID:686720"
                     /db_xref="RGD:1593740"
                     /translation="MAASTMSVCSDACTNSSWQVDDCPESCCEPCGCAPSCCQTLLCT
                     PVSCVSSPCCQSSCCTPSCCQQSSCQPACCTCSPCQQSFGVTLCCKPVCCVPVCCGAS
                     SSCCQQSSCEPSCCTSSPCQQPCGVTLCCKPVCCTPICSGSCCQQSSCQSSCCQPSCC
                     VPVCCRPVCCTPICSSSSSCCQPSCCASVCCKPVCCKPCSSLSLLCRPVCRPACCVPT
                     SSCCASSCQPNCCRPASCVSLLCRPACSRQAC"
ORIGIN      
        1 atggccgcct ccaccatgtc tgtctgctct gacgcttgca ccaactcctc ctggcaggtg
       61 gacgactgcc cagagagctg ctgtgagccc tgtggctgtg cccccagctg ctgccagacc
      121 ctcctctgca ccccagtgag ctgtgtgtcc agcccctgct gccagtcttc ctgctgcaca
      181 ccctcatgct gccagcaatc tagctgccag ccagcttgct gcacctgctc cccctgccag
      241 cagtccttcg gtgtgaccct ttgctgcaag cctgtctgct gtgtgccagt ctgctgtggt
      301 gcttcctcct catgctgcca gcagtctagc tgtgagccct cttgctgcac ctcttccccc
      361 tgccagcagc cctgtggtgt gaccctttgc tgcaagcctg tgtgctgcac acccatctgc
      421 tctggctcct gctgccagca gtctagctgc cagtcctcct gctgccagcc ctcctgctgt
      481 gtgcctgtct gctgcaggcc tgtgtgctgc acacccatct gctcttcctc ctcctcctgc
      541 tgccagccct cctgctgtgc ttctgtgtgc tgcaagcctg tgtgctgcaa gccctgctcc
      601 agcctgtccc tgctgtgccg ccctgtgtgc agacctgcct gctgtgtgcc cacctcctcc
      661 tgctgtgcct cctcctgcca gcccaactgc tgtcgcccag cctcctgtgt gtccctgctg
      721 tgccgccctg cctgctccag acaggcctgc taggtcagaa gtccagctgc cgagtgccag
      781 gtcccatgaa agcagcaggg cacaggactg taactccaac agcctgtagt tgacactcat
      841 gcaggcacag ctcaga
//
