LOCUS       XM_003750410            1992 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus keratin 79 (Krt79), transcript variant
            X1, mRNA.
ACCESSION   XM_003750410
VERSION     XM_003750410.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003750410.5.
            
            On Jul 26, 2016 this sequence version replaced XM_003750410.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1992
                     /gene="Krt79"
                     /note="keratin 79; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 ESTs, 57 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 59 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:683720"
                     /db_xref="RGD:1583372"
     CDS             1..1587
                     /gene="Krt79"
                     /codon_start=1
                     /product="keratin, type II cytoskeletal 79 isoform X1"
                     /protein_id="XP_003750458.1"
                     /db_xref="GeneID:683720"
                     /db_xref="RGD:1583372"
                     /translation="MRSSLSRQTFSTKGGFSSNSASGGGGSRMRTSYSSVTMSRSSGG
                     SGGGVRSGSSSGGFGSRSLYNLGGKNISISVAGGSSSGRALGGFGSGAYVGLGAGRQT
                     FGPVCPPGGIQEVTVNQSLLTPLNVEIDPEIQRVRTQEREQIKTLNNKFASFIDKVRF
                     LEQQNKVLETKWALLQEQSQNTGVARSLEPFFEGYLNTLRRQLDTKQSERGRLDMELR
                     NVQDNLEDFKNKYEDEINKRTALENEFVLLKKDVDAAYMGRMDLQSKVESLIQEIDFL
                     QQLHEMELSQVQTSVSDTNVILSMDNNRSLDLDSIIAEVKAQYELIAQKSRAEAESWY
                     QTKYEELQVTAGKHGDSLRDTKNEISELTRTIQRLQGEVDAVKKQCQQLQTAIAESEQ
                     NGEMALKDAKKKLGDLDTALHQAKEDLARMLREYQDLVSVKLALDMEIATYRKLLESE
                     ESRMSGDCPSAISISVTGNSTSVCSGGAAGFSLGGAGGASKGGYSTSAIHGSAKGGQV
                     SGGTSILRKTTTVKTSSRRY"
ORIGIN      
        1 atgcggtcct ccttgtccag gcagacgttc tccactaaag gaggcttcag ctctaactca
       61 gccagcggag gtggtgggag tcggatgcga accagctaca gctcagtgac tatgtccagg
      121 agcagcggcg gcagtggcgg tggcgtccgc tccgggtcca gctccggggg ctttggcagc
      181 cggagcctct acaacttggg aggcaagaat atctccatca gtgtggctgg tgggtcctcc
      241 tctggccggg cgctaggagg ctttggcagt ggggcctacg ttggcctagg ggctggcagg
      301 cagacatttg gaccagtctg tcctcctggg ggaatccagg aagtcactgt caaccagagc
      361 ctgctgacac ctctcaatgt ggagattgac cccgagatcc agcgggtgcg cactcaggag
      421 cgcgagcaga tcaagaccct caacaacaag tttgcctcct ttattgataa ggtacgcttc
      481 ctggaacagc agaacaaggt gctggagacg aagtgggcgc tgctgcagga gcagagccag
      541 aacacagggg tcgccaggag cctggagcct ttctttgagg gttacttgaa caccctgagg
      601 aggcagctgg ataccaaaca gagcgagcgg gggcggctgg acatggagct gaggaacgtg
      661 caggataatc tggaggactt caagaacaag tatgaggatg agatcaacaa acgcactgcc
      721 ttggagaatg aatttgtgtt gcttaagaag gatgtagatg ctgcatacat gggcagaatg
      781 gatctgcaaa gcaaagtgga gagcctgatc caagagattg acttcctgca acagctccat
      841 gagatggagc tgagccaagt gcagaccagt gtgtctgaca ccaacgtgat cctctccatg
      901 gacaacaacc gcagcctgga tctggacagc atcatcgctg aggtcaaggc ccagtatgag
      961 ctgatcgccc agaagagccg ggcggaggct gagtcctggt accagaccaa atatgaagaa
     1021 ctgcaggtga cagctgggaa gcatggggac agcctccgag acactaaaaa tgagatttca
     1081 gaactcactc gcaccattca gcggctgcag ggagaggtgg acgcagtcaa gaagcagtgc
     1141 cagcagctgc agacagccat cgcagagtcg gagcaaaatg gggagatggc gctcaaggat
     1201 gctaagaaga agcttggaga tctagacacg gccctgcacc aggccaagga ggacctggcc
     1261 cggatgctgc gcgagtacca ggatctcgtg agcgttaagc tggccctgga catggagatc
     1321 gccacctacc gcaagctgct ggagagcgag gagagcagga tgtctggaga ttgtcccagt
     1381 gcaatcagca tctcggtgac cggcaactct acctcggtgt gctccggcgg cgcagctggc
     1441 ttctctttgg gcggggctgg cggggccagc aagggaggct acagtaccag tgcgattcat
     1501 ggctctgcta agggcggtca ggtctctggg ggaacctcca tcttgcggaa gaccaccacg
     1561 gtcaagacct ctagccggcg atactagcag caaggctttg cgagttgggc cttggtcctc
     1621 acgttggccg tggcttctca ggaccacaga ggctgagtat ttttagtgca caatttacat
     1681 ataatttgca tttgggaaag ggctcaaatt tacccaggtt tttctccttg gttgtgcagt
     1741 ggaatgggag ggaagtcagg atcaccagct ggttgatttg ggggtgactt gaccatttag
     1801 agggggtagg atgtccagtt ctgctttgtc acctcagcag atttgctctg agttcagggc
     1861 aagctggagg agggagaagg ggttgccaga gatctgcagc tcttctctct ctcaccagaa
     1921 cagccttgtc acctcatgtc caagtccctg tctgtgcctg tgatgtgtct caataaacag
     1981 taactgcagc aa
//
