LOCUS       NM_001008821            1296 bp    mRNA    linear   ROD 05-DEC-2024
DEFINITION  Rattus norvegicus keratin 40 (Krt40), mRNA.
ACCESSION   NM_001008821 XM_220947
VERSION     NM_001008821.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Hesse,M., Zimek,A., Weber,K. and Magin,T.M.
  TITLE     Comprehensive analysis of keratin gene clusters in humans and
            rodents
  JOURNAL   Eur J Cell Biol 83 (1), 19-26 (2004)
   PUBMED   15085952
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BK004036.1.
            
            On Jan 5, 2005 this sequence version replaced XM_220947.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BK004036.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1296
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /note="keratin 40"
                     /db_xref="GeneID:287679"
                     /db_xref="RGD:1359145"
     CDS             1..1296
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /note="K40; CK-40; cytokeratin-40; type I hair keratin
                     KA36; keratin 40, type I"
                     /codon_start=1
                     /product="keratin, type I cytoskeletal 40"
                     /protein_id="NP_001008821.1"
                     /db_xref="GeneID:287679"
                     /db_xref="RGD:1359145"
                     /translation="MASEGSPDCCSSEPYAGASSCTTASFCPTSTTYLPSTCATSRCQ
                     TPSFLCRAHLPAGCLSPCYLTGGCNSPCLVGNCAWCEEGTFNSNEKETMQFLNDRLAS
                     YLERVRSLEENNAELECRIREQCEPDATPVCPDYQRYFDTIEELQQKILCTKAENSRL
                     AVQVDNCKLAADDFRSKYESELSLRQLVENDISGLRGILGELTLCKSDLEAHVESLKD
                     DLLCLKKDHEEEVNLLREQLGDRLNVELDTAPTVDLNKVLDEMRCQYERVLANNRRDA
                     EEWFAAQTEELNQQQMSSAEQLQGCQTEMLELKRTANTLEIELQAQQTLTESLECTVA
                     ETEAQYSTQLAQMQCLIDSVEHQLAEIRCDLERQNQEYKVLLDTKARLECEINTYRGL
                     LEKEDSRLPCNPGSTASISNSACEPCSAYVICTVENCCA"
     exon            1..447
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /inference="alignment:Splign:2.1.0"
     exon            448..530
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /inference="alignment:Splign:2.1.0"
     exon            531..687
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /inference="alignment:Splign:2.1.0"
     exon            688..849
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /inference="alignment:Splign:2.1.0"
     exon            850..975
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /inference="alignment:Splign:2.1.0"
     exon            976..1196
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /inference="alignment:Splign:2.1.0"
     exon            1197..1296
                     /gene="Krt40"
                     /gene_synonym="Ka36"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcttccg aaggctcccc tgactgctgc tcttctgagc cctatgcagg ggcatcgagc
       61 tgcacaactg cctcattctg ccccaccagc acaacttacc ttcccagcac ctgcgccaca
      121 tccagatgtc aaaccccgag cttcctctgc agggctcacc tcccggccgg ttgcctctca
      181 ccgtgctact tgactggcgg ttgtaacagt ccttgcctgg tggggaactg tgcatggtgt
      241 gaagaaggga cgttcaacag taatgagaag gagaccatgc agttcctgaa tgacagattg
      301 gccagctacc tagagcgggt gagaagcctg gaagagaaca atgcagagct ggagtgcagg
      361 atccgagagc aatgtgagcc cgatgccaca ccggtctgcc cggattatca gcggtacttt
      421 gacaccattg aagagctaca acaaaagata ttgtgcacga aggcagagaa ttctagactt
      481 gccgtgcagg tggacaactg caaactggct gccgatgatt ttaggtcaaa gtatgagagc
      541 gaactgtccc tgcgccagct ggtagagaat gacatcagtg gtcttcgtgg gatcctgggt
      601 gaactgaccc tgtgcaagtc agatctggag gcccatgtgg agtctctgaa agatgatcta
      661 ctttgcctta agaaagacca tgaagaggag gtcaacttgc ttcgtgagca gcttggagat
      721 cgactcaatg tggagctgga cactgccccc actgtggacc tcaacaaggt cctggatgag
      781 atgcggtgtc aatatgagag ggtgctggcc aacaaccgca gggatgcgga ggagtggttc
      841 gctgctcaga cagaagagct gaaccagcag cagatgtcca gtgcagagca gctgcagggc
      901 tgccagactg agatgctgga gttgaagcgt acagccaaca ctctggaaat tgagctccag
      961 gcacagcaaa ccctgacaga gtctctggag tgtactgtgg cagaaactga agcccagtac
     1021 agcacacaac tggcccaaat gcagtgccta attgatagtg tggagcacca gctggctgag
     1081 atccgctgtg acctggagcg tcagaaccag gagtacaagg tgctactgga caccaaggcc
     1141 cggctggagt gtgagatcaa cacatacagg ggcctgctgg agaaagagga cagcagactc
     1201 ccctgcaatc caggctccac agcctccata tcaaacagcg catgtgagcc gtgttcagcc
     1261 tacgtgattt gcacggttga aaactgctgt gcatga
//
