LOCUS       NM_001004130            1446 bp    mRNA    linear   ROD 05-DEC-2024
DEFINITION  Rattus norvegicus keratin 39 (Krt39), mRNA.
ACCESSION   NM_001004130 XM_220946
VERSION     NM_001004130.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1446)
  AUTHORS   Hesse,M., Zimek,A., Weber,K. and Magin,T.M.
  TITLE     Comprehensive analysis of keratin gene clusters in humans and
            rodents
  JOURNAL   Eur J Cell Biol 83 (1), 19-26 (2004)
   PUBMED   15085952
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BK004035.1.
            
            On Sep 5, 2004 this sequence version replaced XM_220946.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BK004035.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN09345329,
                                           SAMN16093044 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1446
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /note="keratin 39"
                     /db_xref="GeneID:303523"
                     /db_xref="RGD:1303032"
     CDS             1..1446
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /note="K39; CK-39; cytokeratin-39; type I hair keratin
                     KA35; keratin 39, type I"
                     /codon_start=1
                     /product="keratin, type I cytoskeletal 39"
                     /protein_id="NP_001004130.1"
                     /db_xref="GeneID:303523"
                     /db_xref="RGD:1303032"
                     /translation="MDTKGSTVTISSSTPPQNCSGNTNVRTNSSNKSCYHDVQSTGHA
                     LQTPQGQGCRPSPCLYRCPNYLIRTYSFHPCPDDCSRCSDGINSHEKETMQILNERLA
                     SYLEKVRMLEGENADLEDKIQEECSKTLPILCPDYLSYYTTIEQLQQKILCTKAENSR
                     LVSQIDNTKLAADDLRAKYEAELSLRQLVEADANGLKQILDALTLSKADLEARVQSLT
                     EELLCLKTNHEEEINSLQCQLGDRINIEVTAAPSVDLNQILQKMRCQYESIVETNRKD
                     VEEWFNTQMEELNQQVVSSSQQQQCCQKDIIELRRTISALEVELQAQHRMRDSQECIL
                     AETEARYTALLAQIQSLIHNLEAQVAEIRSALQRQNQEYEVLLDIKSRLECEIATYRS
                     LLESLDGRLPCNPCTTTWEPSCQARAMECLTPVYTSISLPGIHKPCRASGPPSRILVK
                     ICTITKEIKDGKVISSHEHVQPCYITRPAKV"
     exon            1..450
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /inference="alignment:Splign:2.1.0"
     exon            451..533
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /inference="alignment:Splign:2.1.0"
     exon            534..690
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /inference="alignment:Splign:2.1.0"
     exon            691..852
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /inference="alignment:Splign:2.1.0"
     exon            853..978
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1199
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /inference="alignment:Splign:2.1.0"
     exon            1200..1446
                     /gene="Krt39"
                     /gene_synonym="Ka35"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatacca agggctctac agtgactatt tcttcttcga ccccacccca aaactgctct
       61 gggaatacaa atgtcaggac taactcttct aacaagagct gttatcatga tgttcagtca
      121 actggccatg ctctacaaac tccccagggc cagggctgtc gccccagccc ctgcctttat
      181 cgctgcccta actacttgat aagaacctac agcttccacc cctgtccgga tgactgcagc
      241 cggtgctctg acggcattaa cagtcatgag aaagagacca tgcagatttt gaacgaacgc
      301 cttgcaagct atctggaaaa ggtgcggatg ctggaaggag agaacgcgga cctagaggat
      361 aaaatccagg aggagtgcag caagacactc cccatcctgt gtcctgacta cctgtcctac
      421 tacaccacca tcgagcagct gcagcagaag atcttgtgta ccaaggctga aaattccaga
      481 ctggtctcac aaattgacaa caccaaactg gctgcagatg acttgagagc aaagtatgaa
      541 gctgaattgt ccctacgcca gctcgtggaa gccgacgcca atggcctgaa gcagatcctg
      601 gatgcactga ctctgagtaa ggctgatctg gaggctcgag tccagtctct gacggaggaa
      661 cttctgtgcc tcaaaacaaa ccatgaggag gaaattaatt ccttacagtg ccaacttggg
      721 gacagaatca acattgaagt aacagctgcc ccttctgttg atctaaatca aatcctacaa
      781 aaaatgagat gccagtatga gtccattgtg gagacaaacc gtaaagacgt agaagaatgg
      841 ttcaatacac agatggagga actgaatcaa caggtagtga gcagctctca acagcagcaa
      901 tgctgccaga aggacatcat agagctgaga cggaccataa gtgccctcga ggttgagctg
      961 caggcccagc atcgaatgag agattcccag gaatgcatcc tagcagagac agaggcccga
     1021 tacacagccc tgctggccca aatccagagt ctgatccata acctggaggc tcaggtagca
     1081 gaaatccgca gtgccctgca aagacagaac caggaatatg aagttctgct agacatcaag
     1141 tcccggctgg agtgtgagat agccacctac cgcagtcttc tggagagctt ggatggcagg
     1201 cttccctgta acccatgtac cactacatgg gagccatcct gccaggccag agctatggag
     1261 tgtcttaccc cagtttatac atctatatca ctccccggga ttcacaagcc ctgccgtgcc
     1321 tctggacccc catcccggat actggttaag atatgcacca tcaccaagga gatcaaggat
     1381 ggaaaggtca tttcttctca cgagcatgtg cagccttgct acatcaccag acctgccaaa
     1441 gtctag
//
