LOCUS       NM_001008759            1666 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus keratin 36 (Krt36), mRNA.
ACCESSION   NM_001008759 XM_213483
VERSION     NM_001008759.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Hesse,M., Zimek,A., Weber,K. and Magin,T.M.
  TITLE     Comprehensive analysis of keratin gene clusters in humans and
            rodents
  JOURNAL   Eur J Cell Biol 83 (1), 19-26 (2004)
   PUBMED   15085952
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Tobiasch,E., Winter,H. and Schweizer,J.
  TITLE     Structural features and sites of expression of a new murine 65 kD
            and 48 kD hair-related keratin pair, associated with a special type
            of parakeratotic epithelial differentiation
  JOURNAL   Differentiation 50 (3), 163-178 (1992)
   PUBMED   1385239
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Oct 27, 2022 this sequence version replaced NM_001008759.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BK004043.1, SRR26360181.1562070.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-488               JAXUCZ010000010.1  85539916-85540403   c
            489-571             JAXUCZ010000010.1  85539183-85539265   c
            572-728             JAXUCZ010000010.1  85538808-85538964   c
            729-890             JAXUCZ010000010.1  85538156-85538317   c
            891-1016            JAXUCZ010000010.1  85537942-85538067   c
            1017-1237           JAXUCZ010000010.1  85537565-85537785   c
            1238-1666           JAXUCZ010000010.1  85536779-85537207   c
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1666
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /note="keratin 36"
                     /db_xref="GeneID:287698"
                     /db_xref="RGD:1305792"
     exon            1..488
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..1451
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /note="type I hair keratin KA31; keratin complex 1,
                     acidic, gene 5; keratin 36, type I"
                     /codon_start=1
                     /product="keratin, type I cuticular Ha6"
                     /protein_id="NP_001008759.1"
                     /db_xref="GeneID:287698"
                     /db_xref="RGD:1305792"
                     /translation="MAQICTPTFSAGSAKGLCGTTGSFSRISSIHSMGSCRAPSLVGT
                     VGSVSSFRTGFSGLGSCLPGSYLSSSGFAGSGGWFCEGAFNGNEKATMQVLNDRLANY
                     LEKVRQLEQENAQLECRIREWYESQIPYICPDYQSYFKTAEDLQQKILLTKSENARLI
                     LQIDNAKLAADDFRTKYETELSLRQMVEADINGLRRILDELTLCKADLEAQVESLKEE
                     LLCLKRNHEEEVNALRSQLGDRLNVEVDAAPPVDLNKILDDMRCQYETLVENNRRDVE
                     AWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNALEIELQAQHSMRNSLESTLAE
                     TEARYSSQLGQMQCLITNVESQLAEIRCDLERQNHEYQVLLDVKARLESEIATYRRLL
                     EGEDCKLPAHPCSTDCKPPVRVPFVPSTSCTPAVPCTPAGPCTPASQVSTQIRTITEE
                     IRDGRVISSREHVVPRAV"
     exon            489..571
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /inference="alignment:Splign:2.1.0"
     exon            572..728
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /inference="alignment:Splign:2.1.0"
     exon            729..890
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /inference="alignment:Splign:2.1.0"
     exon            891..1016
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1237
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /inference="alignment:Splign:2.1.0"
     exon            1238..1666
                     /gene="Krt36"
                     /gene_synonym="Ka31; Krt1-5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caacctgcga tcctacctag tctacaagcc tccttgctag catcatggcc cagatctgca
       61 ctccgacttt ctctgctggg tctgctaagg gcctctgtgg caccacagga agcttctctc
      121 ggatatcttc catccactcc atgggctcct gcagggctcc cagcttggtt ggcactgtgg
      181 ggtccgtgtc ctccttcagg acaggcttct ctggccttgg gagctgcttg ccgggctcct
      241 acctgtcctc ttctggcttt gctgggagcg ggggctggtt ctgcgagggc gccttcaatg
      301 gcaacgagaa ggccaccatg caggtcttga atgaccgact ggccaactac ctggagaagg
      361 tgcggcagct ggagcaggag aacgcgcagc tggagtgccg catccgagag tggtatgagt
      421 ctcagatccc atacatctgc ccggactacc agtcctactt caagaccgct gaggatttgc
      481 agcagaagat cctgttgacc aagtctgaga atgccaggct gatattacaa attgacaacg
      541 ccaagctggc tgcagatgac ttcaggacca agtatgagac ggagttgtcc ctgaggcaga
      601 tggtggaggc tgacatcaat ggtctgcgcc ggatcttgga tgagctgacc ttgtgtaagg
      661 ctgacctgga ggctcaggtg gagtccctga aggaggagct gctgtgtctc aagaggaacc
      721 acgaagagga agtcaatgca ctccgttccc agcttgggga tagactgaat gtggaagtgg
      781 atgctgctcc tcccgtggat ctcaacaaga tactggatga catgcgatgc cagtatgaga
      841 ccctggtgga aaataaccgt agagatgtgg aggcttggtt caacactcag actgaggagt
      901 tgaaccagca ggtggtgtcc agctcggagc agctgcagtg ctgccagacg gagatcattg
      961 agctgagacg cacagtcaac gccctggaga tcgagctgca ggctcaacat agcatgagga
     1021 attctctgga atctaccttg gctgagacag aggctcgcta tagctcccag ctgggccaga
     1081 tgcagtgcct gatcacaaac gtggagtccc agctggctga gattcgttgt gacctggaac
     1141 ggcagaacca tgaatatcag gtgttactgg atgttaaggc ccggcttgag tcagagattg
     1201 ctacctaccg ccgcctgctg gagggcgagg actgcaagct tcctgcccac ccttgttcca
     1261 ccgattgcaa gcctcctgta agagttcctt tcgtcccttc tacatcctgc accccggctg
     1321 taccctgcac cccagctggg ccctgcaccc cagcttctca agtcagcacc cagatccgca
     1381 ccatcactga ggagatcagg gatggaagag tgatctcctc cagggagcac gtggtgcccc
     1441 gtgcagtgtg aacatccacc agtggggccg aggccacagg aaggaggacg ccttgtggct
     1501 cttggcagct aaatgatctc acacttccct agggccctcc ttgcttagca ggtttttcta
     1561 ctaaaattca tctattgttt ttggtcttaa ctgtgctttt tcccgccatg caaagccagg
     1621 ttcccctgga aatattccca ataaagtgtt ctcttggcat agcaaa
//
