LOCUS       NM_001008817            1317 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus keratin 31 (Krt31), mRNA.
ACCESSION   NM_001008817 XM_006247392 XM_579214
VERSION     NM_001008817.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Pieragostino,D., Agnifili,L., Fasanella,V., D'Aguanno,S.,
            Mastropasqua,R., Di Ilio,C., Sacchetta,P., Urbani,A. and Del
            Boccio,P.
  TITLE     Shotgun proteomics reveals specific modulated protein patterns in
            tears of patients with primary open angle glaucoma naive to therapy
  JOURNAL   Mol Biosyst 9 (6), 1108-1116 (2013)
   PUBMED   23580065
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Hesse,M., Zimek,A., Weber,K. and Magin,T.M.
  TITLE     Comprehensive analysis of keratin gene clusters in humans and
            rodents
  JOURNAL   Eur J Cell Biol 83 (1), 19-26 (2004)
   PUBMED   15085952
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On or before Aug 6, 2021 this sequence version replaced
            XM_006247392.3, NM_001008817.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760475, SAMN06621351
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-414               JAXUCZ010000010.1  85482887-85483300   c
            415-497             JAXUCZ010000010.1  85482607-85482689   c
            498-654             JAXUCZ010000010.1  85482159-85482315   c
            655-816             JAXUCZ010000010.1  85481186-85481347   c
            817-942             JAXUCZ010000010.1  85480970-85481095   c
            943-1163            JAXUCZ010000010.1  85480561-85480781   c
            1164-1317           JAXUCZ010000010.1  85479796-85479949   c
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1317
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /note="keratin 31"
                     /db_xref="GeneID:450228"
                     /db_xref="RGD:1359411"
     exon            1..414
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..1317
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /note="type I hair keratin KA25; keratin 31, type I"
                     /codon_start=1
                     /product="keratin, type I cuticular Ha1"
                     /protein_id="NP_001008817.2"
                     /db_xref="GeneID:450228"
                     /db_xref="RGD:1359411"
                     /translation="MPYNCCLPALSCRTSCSSRPCVPPSCHGCTLPGACNIPANVGNC
                     NWFCEGSFNGNEKETMQFLNDRLASYLEKVRQLERENAELESRIQERSQQQDPLVCPA
                     YQAYFRTIEELQQKILCSKSENARLVVQIDNAKLAADDFRTKYETELSLRQLVESDIN
                     GLRRILDELTLCKSDLEAQVESLKEELLCLKRNHEEEVNTLRCQLGDRLNVEVDAAPT
                     VDLNRVLNETRCQYEALVETNRREVEEWFTTQTEELNKQVVSSSEQLQSCQAEIIELR
                     RTVNALEIELQAQHNLRNSLENTLTESEARYSSQLSQVQCLITNVESQLGEIRADLER
                     QNQEYQVLLDIRARLECEINTYRGLLESEDCKLPCNPCATSNACGKPIGPCVSNPCAP
                     CPPPAPCTPCVPRSRCGPCNSFVR"
     exon            415..497
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /inference="alignment:Splign:2.1.0"
     exon            498..654
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /inference="alignment:Splign:2.1.0"
     exon            655..816
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /inference="alignment:Splign:2.1.0"
     exon            817..942
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1163
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /inference="alignment:Splign:2.1.0"
     exon            1164..1317
                     /gene="Krt31"
                     /gene_synonym="Ka25"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagctctga ggcttggagg attcactctg tgacttcagc ccggcacttc aaatccctcc
       61 aacaccatgc catacaactg ctgcctgccc gccctgagct gccgaaccag ctgctcctcc
      121 aggccctgcg tgccccccag ctgccatggc tgcaccctgc ccggggcctg caacatcccc
      181 gccaatgtgg gcaactgcaa ttggttctgt gagggctcct tcaatggcaa tgagaaggag
      241 accatgcagt tcctgaatga ccgcctggcc tcctacctgg agaaggtgag gcaactggag
      301 agagagaatg cagagctgga aagcaggatc caggagagga gccagcagca ggaccccctg
      361 gtgtgtcccg cctaccaggc ctacttcagg accattgagg agctgcagca gaagatcctg
      421 tgcagcaaat ctgagaacgc caggctggtg gtgcagattg acaacgccaa gctggctgca
      481 gacgacttca ggaccaagta tgagacagag ctcagtctga ggcagctggt ggagtcagac
      541 atcaatggcc tgcgcagaat cctggacgag ctgaccctct gcaagtctga cctggaggca
      601 caggtggagt ccctgaagga ggagctgctg tgtctcaaga ggaaccacga ggaggaagtc
      661 aacaccctgc gctgccagct tggagaccgc ctcaacgtcg aggtggacgc tgctcccact
      721 gtggacctga accgggtgct caatgagacc aggtgtcagt acgaggccct ggtggaaacc
      781 aaccgccggg aagtggagga atggttcacc acacagactg aggagctgaa caagcaggtg
      841 gtgtccagct cagagcagct gcagtcctgc caggccgaga tcatcgagct gagacgcaca
      901 gtcaatgccc tggagatcga gctgcaggcc cagcacaacc tgagaaactc tctggagaac
      961 accctgacag agagtgaggc tcgctacagc tcccagctat cccaggtgca gtgcctgatc
     1021 accaacgtgg agtcccagct tggtgagatc cgggctgacc tggagcgtca gaaccaggag
     1081 taccaggtgc tgctggacat ccgggcccgg ctggagtgtg agatcaacac gtacaggggc
     1141 ctgctggaga gcgaggactg caagctacct tgcaacccct gtgccacaag caacgcgtgc
     1201 ggcaagccca ttgggccctg cgtctccaat ccctgcgccc cctgcccacc ccctgcccct
     1261 tgcacacctt gtgtcccacg ttcccgctgt gggccatgca atagctttgt acgctag
//
