LOCUS       NM_001004022            1687 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus keratin 15 (Krt15), mRNA.
ACCESSION   NM_001004022 XM_213482
VERSION     NM_001004022.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
            Melvin,J.E. and Yates,J.R.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   3  (bases 1 to 1687)
  AUTHORS   Hesse,M., Zimek,A., Weber,K. and Magin,T.M.
  TITLE     Comprehensive analysis of keratin gene clusters in humans and
            rodents
  JOURNAL   Eur J Cell Biol 83 (1), 19-26 (2004)
   PUBMED   15085952
REFERENCE   4  (bases 1 to 1687)
  AUTHORS   Hofmann,I., Mertens,C., Brettel,M., Nimmrich,V., Schnolzer,M. and
            Herrmann,H.
  TITLE     Interaction of plakophilins with desmoplakin and intermediate
            filament proteins: an in vitro analysis
  JOURNAL   J Cell Sci 113 (Pt 13), 2471-2483 (2000)
   PUBMED   10852826
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC101868.1.
            
            On Sep 18, 2005 this sequence version replaced NM_001004022.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC101868.1, BK004045.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784, SAMN16676789
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1687
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /note="keratin 15"
                     /db_xref="GeneID:287700"
                     /db_xref="RGD:1303044"
     exon            1..536
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..1415
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /note="K15; CK-15; cytokeratin-15; type I keratin KA15;
                     keratin 15, type I"
                     /codon_start=1
                     /product="keratin, type I cytoskeletal 15"
                     /protein_id="NP_001004022.1"
                     /db_xref="GeneID:287700"
                     /db_xref="RGD:1303044"
                     /translation="MATTFLQTSSTFGSGSTRGGSLRVGGGSFGGGSLYGGGGSRSIS
                     ASSARFVSSGAGVGFGGGMSCGFGGGFGGGFGGGFGDFGGGDGGLLSGNEKVTMQNLN
                     DRLASYLDKVRALEEANTELEVKIRDWYQKQSPASPDRDYSHYFKTMEEIRDKILAAT
                     IDNSRVILEIDNARLAADDFRLKYENELALRQGVEADINGLRRVLDELTLARTDLEMQ
                     IEQLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRMLAEMREQYEAIAE
                     KNRRDVEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTLQGLEIELQSQLSMKAG
                     LENSLAEVECRYATQLQQIQGLITGLETQLSELRCEMEAQNQEYNMLLDIKTRLEQEI
                     STYRNLLEGQDAKMAAIGVREASLRGGSSGGGSNFHISVEESVDGKVVSSRKRES"
     exon            537..619
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
     exon            620..776
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
     exon            777..938
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
     exon            939..1064
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
     exon            1065..1285
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
     exon            1286..1311
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
     exon            1312..1658
                     /gene="Krt15"
                     /gene_synonym="Ka15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccagctcag acgctcctgc tagagtctct cccctgcttg ctagggaccc gaaggcacag
       61 gctgcctgac catggccacc acattcttgc agacatcttc cacctttgga agtggctcta
      121 cccgaggggg ttccctccgt gttggtggag gcagctttgg tggagggagt ctctatgggg
      181 gaggtgggag ccgaagcatc tctgcttctt ctgctaggtt tgtctcttca ggggcaggag
      241 tgggtttcgg gggtggcatg agttgtggtt ttggtggagg ctttggtggg ggttttggcg
      301 gtggcttcgg tgactttggt ggtggcgatg gaggtctcct ctctggcaat gagaaggtga
      361 ccatgcagaa cctcaacgac cgcctggcct cctacctgga caaggtgcgc gccctggaag
      421 aggccaacac agagctggag gtgaagatcc gagactggta ccagaagcag agcccggcaa
      481 gtccagaccg ggactacagc cattacttca agaccatgga agagatccgg gacaaaattc
      541 tggctgccac cattgacaac tcgcgtgtta tcctggagat cgacaatgct aggctggcag
      601 cggacgactt caggctcaag tatgagaatg agctggccct tcgtcagggc gtggaggccg
      661 acatcaatgg gctgcggagg gtgctggatg aactgaccct ggccaggact gacctggaga
      721 tgcagattga gcagttgaac gaggagctgg cctacctgaa gaagaatcat gaggaggaga
      781 tgaaagagtt cagcagtcag ctggctggcc aggtcaatgt ggaaatggac gcagcacccg
      841 gggtggacct gacccgcatg ctggcagaga tgagggaaca gtatgaggcc attgcggaga
      901 aaaaccgtcg ggatgtagag gcctggttct tcagtaagac tgaagagctg aacaaggagg
      961 tggcgtctaa cacagaaatg atccagacca gcaagactga gatcacagac ctgagacgga
     1021 ccctgcaggg gctagagatc gagctgcagt ctcaactcag catgaaagcc ggactggaga
     1081 actctctggc agaggtggag tgccgctatg ccacacaact gcagcagatc caggggctca
     1141 ttaccggcct ggagacccag ctgagtgagc tccgctgtga gatggaggct cagaaccagg
     1201 agtacaacat gttactggac atcaagactc ggctggagca ggagatcagc acttaccgga
     1261 acctgcttga gggccaggat gctaagatgg ctgctattgg tgtcagggaa gcatccctga
     1321 gaggaggcag cagcggcggt ggcagcaatt tccacatcag cgtggaggaa tcggtcgacg
     1381 gaaaagtggt ttcttcccgt aagagagaaa gctaagaatc cggtgcagga gaaaagaacc
     1441 ttgccacccc ctgctttccc tgggctgaga gaggcactgg acagagaggc tgggaaagca
     1501 gactccagtc catgcctttg aggatctctc tgctttcctg ttcctggctc tgcatgttct
     1561 tcctagtgta gcttcctttt gagtgtggtg gtgcaggaaa caacagacct tgtaggtggc
     1621 tgttccttca ataaagaatc acattttctt ttcacaaaaa aaaaaaaaaa aaaaaaaaaa
     1681 aaaaaaa
//
