LOCUS       XM_039082794            2363 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus KRI1 homolog (Kri1), transcript
            variant X4, mRNA.
ACCESSION   XM_039082794
VERSION     XM_039082794.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082794.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2363
                     /gene="Kri1"
                     /note="KRI1 homolog; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 15 ESTs, 3 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 85 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:687183"
                     /db_xref="RGD:1588903"
     CDS             136..1890
                     /gene="Kri1"
                     /codon_start=1
                     /product="protein KRI1 homolog isoform X3"
                     /protein_id="XP_038938722.1"
                     /db_xref="GeneID:687183"
                     /db_xref="RGD:1588903"
                     /translation="MYLKDYERKVILEKEGKYVDEDNSDGESVDHRLQETATKSYIEE
                     QRQLKESFRAFVEDSSDEDSAGEGGSGLLQKHTKSGEEKAQEDVDYLEWLKGQKEIDS
                     SESLKELTHLKEYWNNPELDEGEQFLRDYILNKRYEEDEEEETEEERVLGPPVQLAVD
                     DSSDEGELFLKKQEDFEHKYNFRFEEPDSASVKTYPRSIASSVRRKDDRRKEKREETR
                     ERKKREKAKKQEELKQLKNLKRKEILAKLEKLRQVTGNETLGLEEQDLEDDFDPAQHD
                     QLMQKCFGDAFYGTVEEEKPQFEEEEGLEDDWNWDTWGGPEQNGAWSQQELHCEDPDF
                     NMDADYDPSQPRKKLREAPTSGKRKRKSPFAAAVGQEKPMFDPGDKTFEEYLDEYYRL
                     DYEDIIDDLPCRFKYRTVVPCDFGLSTEEILSADDKELNRWCSLKKTCMYRSEQEEMQ
                     EQRAYSQKAQSVWKKRQIFKSLCQEEVEMPTEATGKSPSKASSQVQLPMPSAAGGKKP
                     QAELSGAKEEELAHTPCPEKPASQKQKSKKARLLGPTVTLGGHKFSRQRLQAFGLNPK
                     RLHFRQLGRQRKKQQSHA"
ORIGIN      
        1 agatcgctac ggagatcggg acgacggcag cgactccagt tccgagtctg actccagcga
       61 tgagcatgtg aagcctcctc ttcagagagt gaggaggagt cagcagcctt gggaaagcag
      121 aagaaagtac agcccatgta cctgaaggac tatgagagga aggtcatctt ggagaaagaa
      181 ggcaaatatg tggacgagga caactctgat ggggagagcg ttgatcacag gctccaggaa
      241 acagccacaa agagttacat agaagagcag agacagctga aggaaagctt ccgtgccttt
      301 gtggaggaca gcagcgatga ggacagtgcc ggggaaggtg gctctgggct gctgcagaag
      361 cacactaaga gtggggaaga aaaggcccag gaggatgtgg actacctgga gtggctaaag
      421 gggcaaaagg agatcgacag ctctgagtcg ctgaaagaac tgacacacct caaggagtac
      481 tggaacaacc cagaactgga cgagggggag cagttcctga gggattatat cctcaacaaa
      541 cgctatgaag aggacgagga ggaggagaca gaggaggaaa gggttctggg ccccccagtg
      601 cagctggcgg tggacgactc ctcagatgaa ggggagctat tcctgaagaa gcaggaagac
      661 tttgaacaca agtacaactt ccgctttgag gagcctgact cagcctcagt caagacatac
      721 ccgcggagca tcgcgtcgtc tgtgcgtcgc aaggacgacc gcaggaagga gaagagggag
      781 gagaccaggg agcggaagaa gagggagaaa gccaagaagc aggaggagct gaaacagttg
      841 aagaacctca agaggaagga gattctagcc aagctggaga agctgcgcca ggtcactggc
      901 aacgagacat tgggccttga ggagcaggac ctggaggatg actttgaccc tgcccagcac
      961 gaccagctca tgcagaaatg ctttggagat gccttctacg ggactgtgga agaagagaag
     1021 ccacagtttg aggaagagga ggggctggaa gatgactgga actgggacac gtggggtgga
     1081 cctgagcaga atggggcctg gagccaacag gagctgcact gtgaggaccc tgactttaac
     1141 atggatgcag actatgatcc cagccaacct cggaagaagc ttcgtgaagc ccccacctca
     1201 ggcaagagaa agcgcaagtc tccgtttgca gctgcagtgg ggcaggagaa gcccatgttt
     1261 gaccctgggg acaagacctt tgaggagtac ctggatgaat actacaggct ggactatgag
     1321 gacattattg acgacctgcc ttgtcgcttc aagtaccgca ctgtcgtccc ctgtgacttt
     1381 gggctcagca cagaggagat cctttcagct gatgacaagg aactgaatcg ctggtgttcc
     1441 ctgaagaaga cctgcatgta caggtcggag caggaagaga tgcaggagca gcgggcgtac
     1501 agccagaagg cccagagcgt gtggaagaag aggcagatct tcaagtctct gtgccaggaa
     1561 gaggtggaaa tgcccacaga agccacagga aagtcaccca gcaaggccag ctcacaagtc
     1621 cagctgccca tgcccagtgc agctgggggg aagaagcccc aggctgagct ctcaggagcc
     1681 aaggaagaag agttggccca cacaccctgc ccagagaagc cagcatccca gaagcagaag
     1741 agtaagaagg ccaggctgct gggtcccaca gtgacacttg gaggtcacaa gttcagccga
     1801 cagagattgc aggcctttgg cctcaacccc aaaaggctgc acttccgcca gttgggtcgc
     1861 caacgcaaga aacagcagag ccacgcctga gggccacagg gagccaacct gcctcccggg
     1921 ctaagctgct gaccatactc cgcctgttgg cctagggaag ctgcctgcag cgggggcacc
     1981 gctgcttcta agctggggaa ctgaggctgc cagagccttg tcttcccaca gacaacctga
     2041 aagtcacaac cacaggcaca ctcaagtctg catgtttatc agcctccact gacagtcagt
     2101 cagtcctccc agtcatccag cgcaggctac agaacttgaa tcaggccctg agtgagtgcc
     2161 ccggagccca ctccatcccc ggctcctgag gagtcagggg cagctggggg tgaggactcg
     2221 aaagggcaca accccaagct gggggcctag ataggtctca gctgtgttgg ggaggatcgg
     2281 ggacatgagg acaggggtcc agcaccacct ctggagttcc agatcccata cctgacatga
     2341 cataaataaa aaaataaata gtc
//
