LOCUS       NM_001009413            1660 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus lysine-rich coiled-coil 1 (Krcc1), transcript
            variant 1, mRNA.
ACCESSION   NM_001009413 XM_232068
VERSION     NM_001009413.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Mar 26, 2021 this sequence version replaced NM_001009413.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087628.1, SRR26643429.16712.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-143               JAXUCZ010000004.1  104819958-104820100
            144-310             JAXUCZ010000004.1  104829852-104830018
            311-1660            JAXUCZ010000004.1  104831638-104832987
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q32"
     gene            1..1660
                     /gene="Krcc1"
                     /gene_synonym="RGD1306495"
                     /note="lysine-rich coiled-coil 1"
                     /db_xref="GeneID:312437"
                     /db_xref="RGD:1306495"
     exon            1..143
                     /gene="Krcc1"
                     /gene_synonym="RGD1306495"
                     /inference="alignment:Splign:2.1.0"
     exon            144..310
                     /gene="Krcc1"
                     /gene_synonym="RGD1306495"
                     /inference="alignment:Splign:2.1.0"
     exon            311..1660
                     /gene="Krcc1"
                     /gene_synonym="RGD1306495"
                     /inference="alignment:Splign:2.1.0"
     CDS             333..1103
                     /gene="Krcc1"
                     /gene_synonym="RGD1306495"
                     /codon_start=1
                     /product="lysine-rich coiled-coil protein 1"
                     /protein_id="NP_001009413.1"
                     /db_xref="GeneID:312437"
                     /db_xref="RGD:1306495"
                     /translation="MKHSNKPYDSFQDELEDYIKVQKARGLEPKTCFRRMRGEYLESC
                     GYREEFDSRPRYRMFDQRIPSGTNHSYPRSCSSSQTEDRVPQWLPAHDKIRLNSLNYC
                     QFTRDGFSEKPVSLNLSQQEYNCGSYSVESVVHKDLCSGHSTIDPQVSHRQMYQKRKR
                     HLEEGRERQEERPKHERKRSSEEMDLNKHKSIQRKKTKAETETVQDGTEKLKNRKEKK
                     NRDVSSKKEDRKRRKEKKEQGEERTEEEMLWDQSILGF"
ORIGIN      
        1 gcctgctctg cggcggaggc ggcggcggcg gcagtggtgt tcctgcctct ccgccacctc
       61 caccgcagcc tctgaccccc ggccggcgtt gttggcgggg agggggacag tagttgtaga
      121 cgcccgcccc tgcctcagag aaggtgaatg agagttgagt attagacaaa aatagatata
      181 ctctctactc catggtatag ctccctgatt gttgtagtct tcactttgtg gagcattcat
      241 gctgaaaaac tgaagcaatt aatggttgaa tatgatcaga tttcaccatc aagttctcag
      301 cctgataacg ataatccctt tctgtcaacc taatgaagca ttcaaacaaa ccatatgact
      361 cttttcaaga tgaacttgaa gattatatta aagtacagaa agccagaggc ttagagccaa
      421 agacttgttt cagaaggatg agaggggaat atttggaaag ctgtgggtac agagaagagt
      481 ttgattccag gcccaggtat agaatgtttg atcaaagaat cccatctgga acaaaccatt
      541 catacccaag atcatgcagt agttcacaga cagaagaccg ggtaccccag tggttaccag
      601 ctcatgacaa gataagacta aactctctga actactgtca atttaccagg gatggcttct
      661 cagaaaaacc agtctccttg aaccttagtc agcaagaata caattgtggc tcatatagtg
      721 tagaatctgt agttcacaag gatctctgct caggacacag taccatcgac cctcaagtca
      781 gtcatagaca aatgtaccag aagaggaaac gacatctaga ggagggcaga gaaaggcagg
      841 aagaacggcc caaacatgag aggaaaagga gttctgagga aatggattta aacaaacata
      901 agagcatcca aagaaagaaa acaaaggcag aaacagaaac tgtacaggat ggtacagaaa
      961 agcttaagaa tcgaaaagag aaaaaaaacc gagatgtatc atctaagaaa gaggaccgta
     1021 agcgtaggaa ggaaaaaaag gaacaaggtg aagaaaggac agaggaggag atgctttggg
     1081 accagtctat ccttggattt tgaagctcct tagatctcct gaggctcaac tgaaataata
     1141 gtcaaagagc ttgtttttat gtgcattcat attcatgtca cttgcatatg tggacagaag
     1201 ttcgaacttc taacagagtg aacatgaagt atttagtgtg cttgttttcc aacatggaga
     1261 tttctatttt ctaaaagatt tattaatttt tcttacatat ggtagaattt ccctttaaga
     1321 gtgtggctct gcttttattg accaaattgc tgtggtagtg gaattatttt cccttgggag
     1381 atcatttatt taaaattgga ggattaactg acttttgtgg aatctatttc ttggttgggt
     1441 ttcttttagt tttgagtcac atattttgct cactcactgg ctttctctat gaggcaattt
     1501 agatttcctt ttttagatct aacttgcaat atatttttct gggttggaaa atgaaataac
     1561 ataattttat cttacatata gttttaaaag tttcagagac ttcacacaaa atcagtttat
     1621 attctgaaaa tgtttataat aaagtatttt aacttctgga
//
