LOCUS       XM_039101256            6786 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus kinase non-catalytic C-lobe domain
            containing 1 (Kndc1), transcript variant X1, mRNA.
ACCESSION   XM_039101256
VERSION     XM_039101256.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6786
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6786
                     /gene="Kndc1"
                     /note="kinase non-catalytic C-lobe domain containing 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 ESTs, 8 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 47 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:361672"
                     /db_xref="RGD:1565261"
     CDS             1..5229
                     /gene="Kndc1"
                     /codon_start=1
                     /product="kinase non-catalytic C-lobe domain-containing
                     protein 1 isoform X1"
                     /protein_id="XP_038957184.1"
                     /db_xref="GeneID:361672"
                     /db_xref="RGD:1565261"
                     /translation="MQAMDPASRGFYEEDGKDLDFYDFEPLPTLPEDEENVSLADILS
                     LRDRGLSEQEAWAVCLECSLSMRSVAHAAIFQTLCITPDTLAFNTSGNVCFMEQLSDD
                     PEGAFVPPEFDLTGNTFEAHIYSLGATLKAALEYVTEPELEPKLSTDLEGLLRQMQAE
                     DPRDRPDLQSIIALCEEKMQPVSSCRLCRSLSAIGRRVLSIESFGAFQELSENTWRGR
                     PAPRNVGPKKMPGDLSTDPEALSSSKGLLQPPASRDAEQEAGQRPRAPSPKPLLSAPM
                     RNGENPGQEGLANLVLDARCPLGELDRDILRRSRLKKAQTFPRLLQESTEASTLCLSL
                     NSSRNQLAKSEFFPPDPRKLFLEGKNGLSGFKTQSKSRLWPEQEPGVPLDMTPGAGRN
                     PHRSPGASGQLEATSPSQGSVEYKPSPSPVDPGDSDHEDQIPRSEEKIPEESRQLGSA
                     ATEQSLSLQDLLSKLGRPFREYELWALCLSCLSTLQTHKEHPARLCLDNVLVAEDGTV
                     FFGPPPDDGAYNSLFLAPEVSEEKLVTEKASVYCVAAVLWTAAKFSVPRDHKLALPRR
                     LKTLLLDMARRHASERPSAAEAIKVCSSYLLQRGMDSSKILAHLRASTCKVHPEEETI
                     GLQNAFSVVDLKPTMAPAPESSPGFLQVSNDTKLVAVPEPVSGLPPCCIEACELPAAF
                     TSEATHFKPIVLAQDMGVTRDQLALSSGSNEKPKEGSGQLDREGTRKQATLELLEDTD
                     LKMSDQLPHGPELQGATPDPAGDSVPHSSATECSCPHGPALVTQQKGASGTPSSPASS
                     LPSEHRPDGQGPLGTTVPPGPASASQGSRHPCKPPRGKAAASPSSPRGPDGHPEKARP
                     ADRKLCPSGVDTSSPPKMTACPSLQEAMRLIQEEFAFDGYMDNGLEALIMGEYIYALK
                     DLTFATFCGAISEKFCDLYWDEQLLKNLFKVVNGPASPSESTSEEPGSQPERSPSRCS
                     LSSKRPSLHGLGKEKPATTWGSGGPCSPTALSDIDSDTISQGNFEVGFRSQRSIKVTR
                     EQQPEAEVDGQPGPSQESTGNASDTVARLARSEDGGPAVSPGAADFQNCSPGWSSAFY
                     EADCFGADVYNYVKDLERQKANGHTELEAQSPELEQQLMIEKRNYRKTLKFYQKLLQK
                     EKRSKGSEVRTMLSKLRGQLDEMKSKVQFLGLVKKYLQVLYAERWGLEPCALPVIVNI
                     AASPCDTLDFSPLDESSSLIFYNVNKHPCSGRQKKARILQAGTPLGLMAYLYSSDAFL
                     EGYVQQFLYTFRYFCTPHDFLHFLLDRISSTLSRAHQDPTSTFTKIYRRSLCVLQAWV
                     EDCYTVDFIRNAGLLGQLEDFISSKILPLDGTAEHLLGLLEVGTERRADSASRGADLE
                     DPKEAEEDTRPFNALCKRFSEDGITRKSFSWRLPRGNGLVLPHHKERQYTIASALPKP
                     CFFEDFYGPYAKASEKGPYFLTEYSTNQLFTQLTLLQQELFQKCHPVHFLNSRALGVM
                     DKSAAIPKVSSSESLSAKTCSLFLPNYVQDKYLLQLLRNADDVSTWVAAEIVTSHTSK
                     LQVNLLSKFLLIAKSCYEQRNFATAMQILGGLEHLAVRQSPAWRILPAKIAEVMEELK
                     AVEVFLKSDSLCLMEGRRFRAQPTLPSAHLLAMHIQQLETGGFTMTNGAHRWSKLRNI
                     AKVASQVHAFQENPYTFSPDPKLQAHLKQRIARFSGADVAILAADNRANFHQIPGEKH
                     SRKIQDKLRRMKATFQ"
ORIGIN      
        1 atgcaggcca tggacccagc ctcccggggc ttctatgagg aagatggcaa ggacctggac
       61 ttctacgact tcgagccgct ccctaccctg ccggaggatg aggaaaatgt gtctctggct
      121 gacatcctct ccctgcggga ccgaggcctc agtgagcagg aggcctgggc tgtgtgccta
      181 gagtgcagcc tgtccatgcg gagtgtggca catgcagcca ttttccagac cctgtgcatc
      241 acgcctgaca ccctggcctt caacaccagt ggaaacgtgt gcttcatgga gcagctcagt
      301 gatgaccccg agggtgcctt tgtaccccca gagtttgacc tgacaggaaa cacctttgag
      361 gctcacatct actccctggg ggccacactg aaggctgccc tggagtacgt cacagagcca
      421 gagctggagc ccaagctgag cacagacctg gaaggactgc tgaggcagat gcaggcagaa
      481 gaccccaggg accggccaga cctgcagagc atcatagcac tgtgtgagga gaagatgcaa
      541 cctgtgtcct catgccgcct gtgccgcagt ctctcagcca ttggaagaag ggtgctctcc
      601 attgagtcct tcggagcatt ccaggagctc agcgagaaca catggagggg aaggcctgct
      661 ccaagaaatg tggggcccaa gaagatgcca ggagacctca gcactgatcc agaggcactg
      721 tcctcatcaa agggtctact ccaacctcct gcttccagag acgcagagca ggaggctggg
      781 cagaggccca gagccccatc ccccaaacca ctgctgtcag cccccatgag aaacggtgag
      841 aacccaggac aggaagggct ggccaacctt gtcctggatg ccaggtgccc cctgggtgag
      901 ctggacagag acatcctcag acgaagtcgg ctgaaaaagg ctcagacgtt tcccaggctc
      961 ctgcaggaaa gcacagaggc cagcaccctc tgcctgtcac tgaacagctc aagaaaccag
     1021 ctggccaaat ctgagttctt tcccccagac cccaggaagc tcttcctgga agggaaaaat
     1081 ggcctttctg gtttcaaaac gcagtctaaa agcagactgt ggccagagca ggagcctgga
     1141 gtcccactgg atatgacacc aggtgcaggg cgcaatccac acaggagtcc aggagcctcg
     1201 gggcagctgg aggctacatc tcctagccag ggatctgtag agtacaaacc ttcacccagc
     1261 cctgtagacc ctggagattc agaccatgaa gaccaaatac ctaggagtga agagaagatt
     1321 ccagaagaat ccaggcaact gggaagtgca gccacagaac agagcctgtc cctgcaggac
     1381 cttctgtcta agctaggccg gcccttcagg gagtatgagc tgtgggcact gtgcctctcc
     1441 tgccttagca ctctgcagac acacaaggag cacccagctc gcctgtgcct ggacaacgtg
     1501 ctggtggctg aagatgggac tgtgttcttt ggaccacccc ctgacgatgg tgcctacaac
     1561 tcgctcttct tggctcctga ggtgtcagaa gagaagctgg tgacagagaa ggcctctgtg
     1621 tactgtgtgg ctgcggttct gtggacggca gccaagttca gcgtgccccg agaccacaaa
     1681 ctggccctgc cccgtagact caagacactc cttctggaca tggccagacg ccatgcctca
     1741 gaacggccat ctgcagcgga ggccatcaag gtgtgcagca gttacctcct tcagagaggc
     1801 atggacagca gcaagattct agcccacctg cgggcatcca cctgcaaggt tcacccagag
     1861 gaagagacca tcggcctcca aaatgccttc tcagtggttg acctgaaacc caccatggca
     1921 cctgctcctg agagcagtcc aggcttcctg caggtcagca atgataccaa attggtcgct
     1981 gtccctgagc ctgtgtctgg tctacccccc tgctgtatag aagcctgtga gctgccagca
     2041 gccttcacct ctgaggccac tcactttaag cccatagtcc tggctcagga catgggtgtt
     2101 accagagacc agcttgcctt gtcctcgggg tcaaatgaga agcccaaaga aggaagtggt
     2161 cagctggaca gggagggaac aagaaagcag gcaactctgg agcttcttga ggacactgac
     2221 ctaaagatgt ccgaccagct gccacatggt ccagagctgc agggagcaac tccagaccct
     2281 gctggtgact cagtgcccca cagctcagcc acagaatgct cctgcccaca tggccctgct
     2341 ctggtaactc agcaaaaagg agcatcgggg acacccagct ctcccgcctc ttccctgccc
     2401 tctgaacaca ggccagatgg ccagggacca ctgggcacca ctgtgccccc agggcccgcc
     2461 tcagccagcc aaggctctcg acacccatgc aagccaccca ggggtaaggc tgcagcgagt
     2521 ccaagcagcc ctaggggccc ggatggtcat cctgagaagg ctcggccagc agaccgcaag
     2581 ctctgtccat ccggtgtaga tacctcatcc ccccctaaga tgacagcatg cccctcactg
     2641 caggaagcca tgcgcctcat ccaggaggaa tttgccttcg atggctacat ggacaacggg
     2701 ctagaggcac tgatcatggg agagtacatt tacgccttga aagacctcac ctttgccacc
     2761 ttctgtggcg ccatatctga gaagttctgt gacctatact gggatgagca gctgctgaag
     2821 aacctcttca aggtggtcaa cgggccagcc tcaccgtctg agagcacttc cgaggagcct
     2881 ggatcccagc cagaacgctc acccagcaga tgctcactgt ccagcaaaag gccttccctg
     2941 catggactcg gcaaggagaa gccagccacg acctggggca gcgggggacc ctgctcgccc
     3001 acagcactat cagatataga ctctgacacg atctctcagg gaaactttga ggttggattt
     3061 cggtctcaga ggtcaataaa agtcacacga gagcagcaac cagaggccga agtggatggg
     3121 cagcccggtc caagccagga gtcgaccggc aatgcctcag acacagtggc ccggctagct
     3181 agatctgagg atggtggtcc agctgtgtcc ccaggtgcag ctgatttcca gaactgcagc
     3241 cctggctggt ccagtgcctt ttatgaagct gactgctttg gagccgatgt ctacaactat
     3301 gtgaaggatc tggagaggca gaaggccaat gggcacacag aactggaagc ccagagtcca
     3361 gagctggagc agcagctcat gatagagaag agaaactaca ggaagaccct aaagttttac
     3421 cagaaactct tacagaagga aaaacggagc aaaggctctg aggtaaggac catgttatct
     3481 aaactgcgag gacagctaga tgaaatgaag tccaaggtgc agttcctggg cctggtcaag
     3541 aaataccttc aggtcttgta cgcagagcgc tgggggctgg agccctgtgc tctgcccgtg
     3601 attgtgaaca tcgcagcatc cccctgtgat acattggact tcagccctct ggatgagtct
     3661 tcttccctca tcttctacaa tgtcaacaag cacccgtgca gcggccggca gaagaaggct
     3721 cgcatcctac aggctggcac accactggga ctcatggctt acctctactc cagtgatgct
     3781 ttcctcgagg gctacgtgca gcagtttctc tacactttcc ggtacttttg cacaccgcac
     3841 gacttcctgc acttcctcct ggaccgcatc agcagcaccc tatccagggc tcaccaggat
     3901 cctacctcca cctttaccaa gatctacagg cggagcctct gtgtcctaca ggcctgggtg
     3961 gaagactgct acaccgtgga cttcataaga aacgcggggc tgctgggaca gctggaggac
     4021 ttcatctctt ccaagatcct acccctagat ggcactgccg agcacctgct gggcctcctg
     4081 gaggtgggca ctgagcggcg ggctgacagt gcctctcgag gggcagacct agaagatcct
     4141 aaggaggcag aggaggacac cagacccttt aatgccctct gcaagaggtt ctcagaggat
     4201 ggcatcaccc ggaagagctt ctcctggagg ctgcctcggg gcaatgggct agtgctgcca
     4261 catcataagg agcgccagta caccattgcg tcagccctgc caaagccctg cttcttcgaa
     4321 gacttctacg gcccctatgc caaagccagt gagaagggtc cttacttctt gacagagtac
     4381 agcaccaacc agctcttcac gcagctgacc ctcctgcagc aggaattgtt tcaaaagtgc
     4441 caccctgtcc acttcctaaa ttcaagggcc ctgggtgtca tggacaaaag tgcagccatt
     4501 cctaaagtca gctcttctga gtctctttca gccaaaacct gcagtctatt cctacccaat
     4561 tatgtccagg acaaatacct gctacagctt ttaagaaatg cagatgatgt cagcacctgg
     4621 gtggcagctg aaattgtgac cagtcatacc tccaagctgc aggtgaactt gctgtccaaa
     4681 ttcctgctga ttgctaaatc ttgctacgaa cagaggaact ttgcaacggc catgcaaatc
     4741 ctgggcgggc tggaacacct ggccgtgagg cagtcccctg cttggagaat cctgcctgcg
     4801 aagattgctg aggtcatgga agagctgaag gccgtggagg tattcctgaa gagcgacagc
     4861 ctgtgtctga tggagggacg gcgcttccgg gcccagccta cccttccctc cgcccacttg
     4921 ctggccatgc acatccagca gcttgagacc ggaggcttca ccatgactaa tggagctcac
     4981 aggtggagta aactgagaaa catcgccaag gtggcaagcc aggtgcacgc gttccaggag
     5041 aacccctaca cgttcagccc tgaccccaag ctacaggccc acctcaagca aaggatcgcc
     5101 cgttttagcg gggctgatgt cgccatctta gcagcagaca acagggccaa cttccaccag
     5161 atcccaggcg aaaaacactc ccggaagatc caagacaaac tgaggagaat gaaagccaca
     5221 ttccagtagt caagagctcc acctgggtgt aaactcgaaa caggacctga ccaaggaaga
     5281 tgggtccagt ggaaagaacc ccccccaagg gctgctggcg gaagctcagg cacactgagt
     5341 tcccttaggg aaaacagttc ttacttccct gaaagaagtg gaaattgcaa gggactagcc
     5401 tgaggccata gggaaggctg aaccagctcc aacctagccc tatccccaag gcagggtgga
     5461 cacagcattc agtaggcttg tttttgctag aatttaaaaa tcaaatttaa aaaatgaaaa
     5521 gggaatagat tcagctatcc tcagcttcgg accttcttat acctgggttc ctatttattt
     5581 atcattgacc tctccaaaac ccaacacata cccacatctg actccaaaag agcccaaaca
     5641 tagctgcttg ctgatcggtg tttttgtttc cactcagcaa gaaggaccaa aactgtcttt
     5701 tgcactcagt agctccaagg gtctggaacc ttccaccgga gcccaagatt tctagcagcc
     5761 tgtcttggcc aggtttataa atccacccca tcctcagcct atcctgccaa gtcttctggt
     5821 cttctcggtc cccagggagc ggggagaagc agcctctgtc ccagctgggc cttctgcctt
     5881 agctgttgac cctccccgtg gcctgttgtt gctccccatc cccagcttag aacagctgca
     5941 gtcgacaggg atgttgggca gaggctctgc cccctggaaa gggggaagaa cactgtgcac
     6001 taacagcagc accaatgcag gatcgccatc ctgaggcctc tgggagcaaa gtcccttttc
     6061 actgtcctgc gggccccagg agcagcggcc tatcagcctt cagcagctgc gcatgcgcac
     6121 acccatccac tgtgttccct tggctctgca caccactagc gctttgttag acagataaag
     6181 atgtgagtca aacttgttgc cttggttgca tcagacacct caacaactgg cgctgggctt
     6241 tggctcactg ggacgcggtc gtctggccag gagggctagg aatatgatag agaactgtag
     6301 gtgggaaaaa caactgttcg gacgccttag gcagctggaa acaacccaag ccctgccagc
     6361 cacaagacca agactgttct gtgttttaga agtagggatt ttgtagtgaa gcagctagtg
     6421 gtattgctag gaagctgtga cttgtgacca aatgctggat ttttaacgct gagaggtgtt
     6481 tcctcacatg aatttgctgg agacaccaga ccctgcttac actggatgta agtgggactg
     6541 agagtcctgg ccatgcatat gcaacttagt gttttgggac ttttctataa ggattacgtt
     6601 ctgttgatca acgcctacct tttcagattt tgtatctagt gcaggaggtg tccagcgcaa
     6661 accagcattc caatggtgct gacttattgc gtggggaagt gaacaggctt tttggcttca
     6721 gcactgtttg catggcgccc tgatgtcaca aggtacagat ttctaaataa agtcatttct
     6781 accaag
//
