LOCUS       NM_001402231             865 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus kinocilin (Kncn), mRNA.
ACCESSION   NM_001402231
VERSION     NM_001402231.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Kitajiri,S., Sakamoto,T., Belyantseva,I.A., Goodyear,R.J.,
            Stepanyan,R., Fujiwara,I., Bird,J.E., Riazuddin,S., Riazuddin,S.,
            Ahmed,Z.M., Hinshaw,J.E., Sellers,J., Bartles,J.R., Hammer,J.A.
            3rd, Richardson,G.P., Griffith,A.J., Frolenkov,G.I. and
            Friedman,T.B.
  TITLE     Actin-bundling protein TRIOBP forms resilient rootlets of hair cell
            stereocilia essential for hearing
  JOURNAL   Cell 141 (5), 786-798 (2010)
   PUBMED   20510926
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Leibovici,M., Verpy,E., Goodyear,R.J., Zwaenepoel,I., Blanchard,S.,
            Laine,S., Richardson,G.P. and Petit,C.
  TITLE     Initial characterization of kinocilin, a protein of the hair cell
            kinocilium
  JOURNAL   Hear Res 203 (1-2), 144-153 (2005)
   PUBMED   15855039
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000005.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-472               JAXUCZ010000005.1  134600214-134600685
            473-541             JAXUCZ010000005.1  134601629-134601697
            542-616             JAXUCZ010000005.1  134602514-134602588
            617-865             JAXUCZ010000005.1  134603409-134603657
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q35"
     gene            1..865
                     /gene="Kncn"
                     /note="kinocilin"
                     /db_xref="GeneID:690105"
                     /db_xref="RGD:1584061"
     exon            1..472
                     /gene="Kncn"
                     /inference="alignment:Splign:2.1.0"
     CDS             322..696
                     /gene="Kncn"
                     /codon_start=1
                     /product="kinocilin"
                     /protein_id="NP_001389160.1"
                     /db_xref="GeneID:690105"
                     /db_xref="RGD:1584061"
                     /translation="MDIPISTRDFRCLQLACVALGLVAGSIIIGVSVSKAAAAVGGIF
                     LGAAGLGLLIFAYPFLKARFNLDHILPAIGNLRIHPNSGPDHGEGRSSNNSNKEGARS
                     GLSTVTRTLEKLKPGGRGTEEG"
     exon            473..541
                     /gene="Kncn"
                     /inference="alignment:Splign:2.1.0"
     exon            542..616
                     /gene="Kncn"
                     /inference="alignment:Splign:2.1.0"
     exon            617..865
                     /gene="Kncn"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagaccccat ggggcagacc cacctctcta gaaccctggc caaagtggaa atgtggccaa
       61 gcaggaaccc caagaggggc ctctggcttc agagcccttc acaggaggaa gagtagactg
      121 gtcaagagat caagctaggc ctcttgcccc ctggaaagcc gtaggataag gttgcagata
      181 aatccagacc cagaccggcc taaagactta cagtccagga gtttccaccc tggatgtggc
      241 gccccaacaa ggaagcaagc atccatccaa gaagaccaag acttccagga ggcctggaag
      301 catcgtcctg ggtagacctg catggacatc cccattagca ccagagactt ccgctgcttg
      361 cagctggcct gtgtggccct cggcctggtg gccggcagca tcatcattgg tgtctctgtg
      421 tccaaggctg ctgctgccgt gggtggtatc tttcttggtg ctgctggact tgggctcctc
      481 atcttcgcct accccttcct gaaggctcgg ttcaacctgg accacatcct acctgccata
      541 ggaaacctga gaatccatcc taactcagga ccagaccatg gagagggaag atctagcaac
      601 aatagcaata aagaaggagc ccgcagtggc ctgtccacgg tgaccagaac cctggagaag
      661 ctgaagcctg gaggccgggg aaccgaggag ggctgagaac gacctcctgt ctcaccctcc
      721 ccactcccca tactccagtt tcagggccat cctttaagct ggaagatgca gaatgagcct
      781 gggaatactg ggcctacctt ctcttccagt gaggctctcc ctaacagatt ccttcactcc
      841 tggcattgtg gaaagaccca cagga
//
