LOCUS       NM_001009486            1977 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus killer cell lectin-like receptor, subfamily A,
            member 2 (Klra2), mRNA.
ACCESSION   NM_001009486 XM_017592743 XM_579287
VERSION     NM_001009486.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Nylenna,O., Naper,C., Vaage,J.T., Woon,P.Y., Gauguier,D.,
            Dissen,E., Ryan,J.C. and Fossum,S.
  TITLE     The genes and gene organization of the Ly49 region of the rat
            natural killer cell gene complex
  JOURNAL   Eur J Immunol 35 (1), 261-272 (2005)
   PUBMED   15593300
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On or before Jun 3, 2021 this sequence version replaced
            XM_017592743.2, NM_001009486.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643289.14300.1,
                                           SRR26643299.21308.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-96                JAXUCZ010000004.1  166716707-166716802 c
            97-260              JAXUCZ010000004.1  166714667-166714830 c
            261-284             JAXUCZ010000004.1  166714027-166714050 c
            285-374             JAXUCZ010000004.1  166713306-166713395 c
            375-596             JAXUCZ010000004.1  166712214-166712435 c
            597-739             JAXUCZ010000004.1  166696521-166696663 c
            740-840             JAXUCZ010000004.1  166694480-166694580 c
            841-996             JAXUCZ010000004.1  166683077-166683232 c
            997-1977            JAXUCZ010000004.1  166682016-166682996 c
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..1977
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /note="killer cell lectin-like receptor, subfamily A,
                     member 2"
                     /db_xref="GeneID:494194"
                     /db_xref="RGD:1359667"
     exon            1..96
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     exon            97..260
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..1054
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /note="Ly49 inhibitory receptor 8; killer cell lectin-like
                     receptor, subfamily A, member 1"
                     /codon_start=1
                     /product="killer cell lectin-like receptor 2"
                     /protein_id="NP_001009486.1"
                     /db_xref="GeneID:494194"
                     /db_xref="RGD:1359667"
                     /translation="MSEQEVTYTTVRFHKSPGLQNQVRPEETQRPRKAGHRAHSECKV
                     RECSVTWKPIVIVLGILCSLLLVTVAVLLTHIFQSRQEKHEHEQRLNNLDQLYHVMKN
                     DSSLMEERLRNKSLEFETCKNTLDNLNREQNRCYRESKIDLKCFKYKGKQVEGHWFCC
                     GMKCYYFITDNVQWNGCKQICQACSLSLLKIDDEDEMNFLKSQLQGKRYWIGLTYNKS
                     PKKQQWIGDPPKLDVAGVNLGHDRGNCAFLSSFQIDNEDCAKTCGCICEKRLNIFPIL
                     VTCVNQRKQLDLQSDEGESEEMYLT"
     exon            261..284
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     exon            285..374
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     exon            375..596
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     exon            597..739
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     exon            740..840
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     exon            841..996
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
     exon            997..1977
                     /gene="Klra2"
                     /gene_synonym="Klra1; Ly49i8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttcatcttg gagccctaag gacgaggaaa ggccaaattg ttgcccaata gaggataaat
       61 tccctccgcc agaatcattt cctggtagag acacagaaat ctctcgaggc catattttaa
      121 cacaaatcat aatttgcata ctcccaagat gagtgagcag gaggtcactt acaccactgt
      181 gagatttcat aagtctccag ggttgcagaa ccaagtgagg cctgaggaga ctcaaaggcc
      241 caggaaagct ggccacagag ctcactccga atgcaaggtc agagagtgtt cggtcacctg
      301 gaagcccatt gtgatagttc tcggaatcct ctgttccctt ctcctggtaa ctgtggcagt
      361 attgttgaca cacatttttc agtccagaca agagaaacat gaacatgagc aaaggctaaa
      421 taacctcgat caactgtacc atgtcatgaa aaatgacagc tccttaatgg aagaaagatt
      481 aagaaataag tctctagagt ttgagacttg caaaaatact ctggacaatc tcaacagaga
      541 acagaacaga tgctacaggg aaagcaagat tgatttaaaa tgctttaaat acaaaggcaa
      601 acaagtagaa ggacactggt tctgctgtgg catgaaatgc tattatttca tcactgacaa
      661 tgtacagtgg aatggatgta aacagatctg ccaggcttgc agcttatctc ttctgaagat
      721 agatgatgag gatgaaatga acttccttaa gtcccaactt caaggaaaga gatactggat
      781 tggattgaca tataataaga gcccaaagaa acagcaatgg attggtgacc cacctaaact
      841 tgatgtggct ggagtgaatt taggacatga cagaggaaat tgtgcatttc taagttcatt
      901 tcaaatagat aatgaagact gtgctaaaac ctgtggctgt atatgtgaaa agagattgaa
      961 tatattccct attttagtga cctgtgtcaa ccaaagaaag cagcttgatc tgcagagtga
     1021 tgaaggggaa agtgaggaaa tgtatctgac ttaacataac agaagccatc gtcctttctg
     1081 gtaaatagag aagcttgtgt ctggagaata tatacccttt gctctaagat tcgaagtatc
     1141 actctctgtt tctcgaatta tgcacagaac caaatacaga actcttacaa tcacacacat
     1201 tcttcatcat cactaggata atccatttca atatcctgtt gctctgacat cacacttaag
     1261 aaataggatg cagttactct ttgttggttg ataacttttt atgtttatgg aggtagaaga
     1321 attaacctga aaatattttt atttgctgta aaatataatt ttagacttga tgaatagtta
     1381 ccagagtagt tcaatgaacc catacaacct atcatagttc atgtgttctc attctctctc
     1441 tctctctctc tctctctctc tctctctctc tctttctctc tctctctctc tctctctctc
     1501 tcatcaaact gatgcatttg gtaataaaca gaaaccccat atttgcagta atatttattt
     1561 aggccacctg aatgcaatgg ttcagactta taattttata ggtacataag tttgaagaca
     1621 gtcttgtcta cataatatgt ttgtggcaat tgtgggcctt agtgtggtat tctgtgtcat
     1681 gaaatctgat tatgaggatg atgatgatat aataatatta aactgtccat aaatattttc
     1741 taaaagcaag caatttcttt tatagcatca tattgaatag taaaattcaa ggaatgtggt
     1801 atttttgtaa taatatgatc taatttataa tccatattca tatttgtcag ctttctgatg
     1861 tcatgttaat atttactcat gtttaagatt atgccatgca ttcacctgtg gtgttcttta
     1921 gttctgaaaa tgttattgac ttttgacatt tttctgatat taaaaaatta aaatctt
//
