LOCUS       NM_001009718            1207 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus killer cell lectin-like receptor, subfamily A,
            member 1 (Klra1), mRNA.
ACCESSION   NM_001009718 XM_003749817 XM_579315
VERSION     NM_001009718.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Nylenna O, Naper C, Vaage JT, Woon PY, Gauguier D, Dissen E, Ryan
            JC and Fossum S.
  TITLE     The genes and gene organization of the Ly49 region of the rat
            natural killer cell gene complex
  JOURNAL   Eur J Immunol 35 (1), 261-272 (2005)
   PUBMED   15593300
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY651018.1.
            
            On or before Dec 15, 2013 this sequence version replaced
            XM_003749817.2, XM_579315.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY651018.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN11044071 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="PVG"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..1207
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /note="killer cell lectin-like receptor, subfamily A,
                     member 1"
                     /db_xref="GeneID:494193"
                     /db_xref="RGD:1359586"
     exon            1..72
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
     exon            73..236
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..928
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /note="Ly49 inhibitory receptor 6; killer cell lectin-like
                     receptor, subfamily A, member 2"
                     /codon_start=1
                     /product="killer cell lectin-like receptor, subfamily A,
                     member 1"
                     /protein_id="NP_001009718.1"
                     /db_xref="GeneID:494193"
                     /db_xref="RGD:1359586"
                     /translation="MCDQEVTYSTVRFHKSSGLQNQERAEETQGPIEAGHRKCSVLWQ
                     HIKIALGILCSHLLVTLAVLALSIIQYSQENHDLQKTLKHHHNCSTMQSIIDLKEEMM
                     RNKSIECRSGSEYLDSLKREQERWYRKTKTILNSTEHIGKGVKIHWFCYGIKCYYFIM
                     VKKSWNGCQQTCQNSSLPLLKIDHEEELKFLQIRVISDNYWIGLKYHNEEKGWAWTDN
                     GESKLVLSRRKFNLKDGGCVFLSKRRLENTKCDNSYSCICGKTLDKFPG"
     exon            237..326
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
     exon            327..545
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
     exon            546..688
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
     exon            689..792
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
     exon            793..945
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
     exon            946..1192
                     /gene="Klra1"
                     /gene_synonym="Klra2; Ly49i6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaaaggcca actcttcccc caattggggg atcaatttcc tccaccagaa tcacttcggg
       61 gcagagacac agaaatcact caagaacata ttttaagaga gaacatactc tatatattcc
      121 caaaatgtgt gaccaggagg tcacttattc aactgtgaga tttcataagt cttcaggctt
      181 acagaaccag gagagagctg aagagactca agggcccata gaagctggcc acagaaagtg
      241 ttcagtcctc tggcagcaca ttaagatagc tctaggaatc ctctgttccc atctgctggt
      301 aactcttgca gttttggcat tgagcattat tcagtacagt caagaaaacc atgatctgca
      361 gaagactcta aaacaccacc ataactgtag caccatgcaa agtatcatcg acttaaagga
      421 agaaatgatg agaaataagt ctattgagtg ccgttcaggc agtgaatatc tggactccct
      481 caagcgagaa caggaaagat ggtatagaaa aaccaagaca attttaaatt ccacagagca
      541 cataggcaaa ggtgttaaaa tacactggtt ctgctatggt ataaaatgtt attatttcat
      601 catggtcaaa aaatcatgga atggatgtca acagacctgc cagaattcca gcctacccct
      661 tctgaagata gatcatgaag aagaactgaa gttccttcag atccgggtta tttcagacaa
      721 ttactggatt ggattgaaat atcataatga agaaaaggga tgggcatgga ctgacaatgg
      781 agaatctaaa cttgtactga gcagaaggaa gttcaatcta aaagatggag gatgtgtatt
      841 cttatctaaa agaagactag aaaatactaa gtgtgataat tcatacagct gtatttgtgg
      901 gaagacactg gataaattcc ctggttgatt ctcagagcat taaaggactt agtctgctgt
      961 gcaaacagag agacaacctg gaagatttat tctctggtat ctgacttgac agagcagagg
     1021 acatcttctt tccttgtaaa gagtacagag accttcttta gtgtgtttcc aggctttgcc
     1081 tcacaacatt gaggaatctg ttctatttgc ataaaatccc tttgaagtaa agaatgctaa
     1141 ttaacagcct gagttcttaa ttatgagtag aattaaatca tgttaattga aaaaaaaaaa
     1201 aaaaaaa
//
