LOCUS       NM_001107192            2300 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus kelch-like family member 20 (Klhl20), mRNA.
ACCESSION   NM_001107192 XM_001074091 XM_006250112 XM_222806
VERSION     NM_001107192.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Yuan,W.C., Lee,Y.R., Lin,S.Y., Chang,L.Y., Tan,Y.P., Hung,C.C.,
            Kuo,J.C., Liu,C.H., Lin,M.Y., Xu,M., Chen,Z.J. and Chen,R.H.
  TITLE     K33-Linked Polyubiquitination of Coronin 7 by Cul3-KLHL20 Ubiquitin
            E3 Ligase Regulates Protein Trafficking
  JOURNAL   Mol Cell 54 (4), 586-600 (2014)
   PUBMED   24768539
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Lee,Y.R., Yuan,W.C., Ho,H.C., Chen,C.H., Shih,H.M. and Chen,R.H.
  TITLE     The Cullin 3 substrate adaptor KLHL20 mediates DAPK ubiquitination
            to control interferon responses
  JOURNAL   EMBO J 29 (10), 1748-1761 (2010)
   PUBMED   20389280
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            On or before Apr 8, 2021 this sequence version replaced
            XM_006250112.4, NM_001107192.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY724478.1, SRR26643299.52585.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840105,
                                           SAMN12840106 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-84                JAXUCZ010000013.1  75941557-75941640   c
            85-148              JAXUCZ010000013.1  75940568-75940631   c
            149-722             JAXUCZ010000013.1  75918531-75919104   c
            723-881             JAXUCZ010000013.1  75913964-75914122   c
            882-976             JAXUCZ010000013.1  75912731-75912825   c
            977-1092            JAXUCZ010000013.1  75910313-75910428   c
            1093-1276           JAXUCZ010000013.1  75908712-75908895   c
            1277-1420           JAXUCZ010000013.1  75906344-75906487   c
            1421-1554           JAXUCZ010000013.1  75905302-75905435   c
            1555-1763           JAXUCZ010000013.1  75903595-75903803   c
            1764-1870           JAXUCZ010000013.1  75901937-75902043   c
            1871-2300           JAXUCZ010000013.1  75898404-75898833   c
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q22"
     gene            1..2300
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /note="kelch-like family member 20"
                     /db_xref="GeneID:304920"
                     /db_xref="RGD:1309490"
     exon            1..84
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            85..148
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     CDS             126..1955
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /note="kelch-like 20"
                     /codon_start=1
                     /product="kelch-like protein 20"
                     /protein_id="NP_001100662.1"
                     /db_xref="GeneID:304920"
                     /db_xref="RGD:1309490"
                     /translation="MEGKPMRRCTNIRPGETGMDVTSRCTLGDPNKLPEGVPQPARMP
                     YISDKHPRQTLEVINLLRKHRELCDVVLVVGAKKIYAHRVILSACSPYFRAMFTGELA
                     ESRQTEVVIRDIDERAMELLIDFAYTSQITVEEGNVQTLLPAACLLQLAEIQEACCEF
                     LKRQLDPSNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFMLLPANQLIDII
                     SSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVLQHVRLPLLSPKFLVGTVGSDPL
                     IKSDEECRDLVDEAKNYLLLPQERPLMQGPRTRPRKPIRCGEVLFAVGGWCSGDAISS
                     VERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQW
                     SSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRR
                     LGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDM
                     IYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGFDGTT
                     YLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVIKMTHCESHIW"
     exon            149..722
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            723..881
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            882..976
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            977..1092
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            1093..1276
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            1277..1420
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            1421..1554
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            1555..1763
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            1764..1870
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
     exon            1871..2300
                     /gene="Klhl20"
                     /gene_synonym="RGD1309490"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctgcgctat cggctcctga ggtggaggca gagagggtgg agaaggcaga gaagggtgcc
       61 gcagagaaaa aagtgtcaaa gccagtacgg ctttagaata cggtgaagga tacttttcat
      121 ggtgcatgga aggaaagcca atgcgcaggt gtaccaacat tcgaccggga gagactggaa
      181 tggatgtaac aagccgctgt acccttggag accccaacaa actcccagaa ggggttcccc
      241 aacctgctcg catgccctat atctcagaca agcaccctcg gcaaaccttg gaagtgatca
      301 acctcctgag aaagcaccga gagctatgtg atgtggtgct agttgtgggc gctaagaaga
      361 tatatgccca ccgagtcatt ctgtcagcct gcagccccta cttccgagca atgtttacag
      421 gagagctagc agagagccgg cagacagaag tcgtgatccg agacatagat gagagggcta
      481 tggagctact gattgacttt gcatatacct cccagataac tgtggaagag ggcaatgttc
      541 agaccctctt gcctgccgct tgcctcctcc agctggctga aatacaagaa gcctgctgtg
      601 aattcttaaa gagacaatta gatccttcta attgtctggg cattcgggct ttcgctgaca
      661 cacattcttg ccgcgagttg ctaaggattg cagacaagtt cacccaacat aactttcaag
      721 aggtaatgga gagtgaagaa ttcatgttac ttccagccaa ccaactcatc gatataatat
      781 ctagtgatga gctcaatgtt cggagtgaag aacaagtgtt taatgcagtg atggcctggg
      841 tcaaatacag tattcaggaa agacgtcctc agttacccca ggtgctgcag cacgtccgcc
      901 tgcctttgct tagtcccaag ttcctggtgg gcaccgtagg ctctgacccc ctcattaaaa
      961 gtgatgaaga atgcagagac ttggtagatg aggctaaaaa ctacctcctg ttgcctcaag
     1021 agcgacctct aatgcaaggg cctcggacaa ggccacggaa acccatccga tgcggagaag
     1081 tgctctttgc agttggtggt tggtgcagtg gagatgccat ttccagtgtt gaacgctatg
     1141 atccccagac caatgagtgg cgaatggtgg cttcaatgag taaaaggcga tgtggagtcg
     1201 gggtcagtgt tcttgatgac ctgttatatg cagtaggtgg ccatgatgga tcctcatatc
     1261 tcaatagtgt tgaaagatat gaccccaaaa caaaccagtg gagcagtgat gtggccccta
     1321 caagcacctg taggacaagc gttggtgtgg cagtcctcgg aggttttctc tatgctgtgg
     1381 gtggacagga cggtgtctct tgcctcaata tagttgagag gtatgatcca aaggagaaca
     1441 agtggactcg ggtggcttcg atgagcactc gaaggctggg cgttgctgtg gctgttttgg
     1501 gagggttcct gtatgctgta ggtggctctg atgggacatc cccactcaac acagtggagc
     1561 gctacaatcc tcaggaaaac aggtggcata ccatagcgcc tatggggacc cgaaggaaac
     1621 acctaggttg tgcagtgtac caggacatga tctatgctgt gggagggaga gacgacacta
     1681 cagagcttag cagtgctgag agatacaacc ccagaactaa ccagtggtct cccgtggtgg
     1741 ccatgacatc ccgcaggagt ggagttggcc tagccgtggt caatggacag ctcatggcag
     1801 ttgggggttt tgatggtaca acatacttga agaccattga agtttttgac ccagatgcca
     1861 atacatggag gttgtatgga gggatgaatt accgtcggct aggaggtggt gtaggagtta
     1921 ttaaaatgac acattgtgaa tcccatatat ggtgaacaca gaaaaatatc ttgcatacac
     1981 tcctttatat ttggaagagc cttgacttca aagctttcta cagctcgaga aacaatagaa
     2041 caaattttat tctttgccgg tgcctcaaca ttcagaaata ccagtctaac gatggaactc
     2101 acctgcaaaa tgccaccttt gcacaatgcc tttccgctct gtgcagaaga gtatttattt
     2161 ttggctttaa tttatcatgg agttttgatg ggattttgtt tgtgttttgt tggtttgggt
     2221 ccggtccttt gggtttttgt tattgttgtt atgttgtttt taagcttttt tttttactta
     2281 tccttcctac catgaaaaaa
//
