LOCUS       XM_039111185            2103 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus KLF transcription factor 17 (Klf17),
            transcript variant X1, mRNA.
ACCESSION   XM_039111185
VERSION     XM_039111185.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111185.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2103
                     /gene="Klf17"
                     /note="KLF transcription factor 17; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:298449"
                     /db_xref="RGD:1307711"
     CDS             801..1952
                     /gene="Klf17"
                     /codon_start=1
                     /product="Krueppel-like factor 17 isoform X1"
                     /protein_id="XP_038967113.1"
                     /db_xref="GeneID:298449"
                     /db_xref="RGD:1307711"
                     /translation="MEQDNEQQAMHQSPMDNEMLMPVSHMPGSSGNSGFHQPPAPQYL
                     PELMRPYMASAEEFRCSEGGWEPQFIRSLPESGARCPSQLIPTPSQNYCQRSIGRGSH
                     VMPVGNPGTLGVAISFSENLMSQGGLSSPASCGVSVMTHSNAPTMPYSVSPTVPATTG
                     SLKPGIFLVPGMPSAETHAVTPYMNQMLHSVNPEMVSARFQQLLPIDSQDSLATQSNV
                     QEGPFMCEQPTPAPQERETASTSRGATRRRSLVLRPYVCSYDDCGKAYTKRSHLVSHL
                     RKHTGEKPYICDWKGCKWRFFRSDELGRHKRIHTRYRPHKCDECNREFMRSDHLRQHK
                     RTHLPKTVGLHTSTRKPGETYTLNPIPWEAEAGAQNIQDQIGLQSLTLL"
ORIGIN      
        1 ggaactcaat atgtagatca gggtggtctt gaactcagag atctgtctgt ttggcttatt
       61 cctctccaga aacttttttt taacatttat ttttacgatg agtattttgc acgtatgcat
      121 ggtcattgtg ttcatgcctg gtacccaagg caatcagaag agggtgtcca atctcctaga
      181 actggagtta cagagaatca gtgcccacac acaaggtatg tgggatgcct aaattgtatg
      241 gtgtgggcat ccgggattca ctttgcgtgg agaaaggaca gaggtgctca tccttagcgg
      301 gaaccatcga tcctgcccta tgaaaaccta ctgcgttagt ctggagggat tatggcgtct
      361 cttttgtctg cagaggcttg tgtacccgcc ctgcctctgt catccagtct tctgtttctc
      421 cactgagatt aaagaggctg tcttgactga agtctcagat cgcggtttcc ccaaaacccg
      481 tttgggtcaa acagttgctc aaaactgtag gttagagggt ctaggtggag aagggcagac
      541 acagtgtctt taaaaagtgg taaagtccag tgatttccct gaggcataag gcctacaacg
      601 agttgtggaa ctggatggat gatgagctgg gaggcattgg gtgggtgtgg ccttgactcc
      661 gcccagtcgc tcaggggcaa ataaaagctc cacgcagcca ttgtgggatt atggcgtagc
      721 ggtgttggga tccatgcctg tgacggtgtg tggcgccagg ctaatctccc ggtttgttct
      781 gaacttggga ctcagccgac atggagcagg acaatgagca gcaggctatg caccagtctc
      841 ccatggataa cgagatgttg atgccagtgt cgcatatgcc tgggtcttct ggaaacagcg
      901 gatttcatca gccaccagcc cctcaatatt taccagagtt gatgaggcct tatatggcct
      961 cagctgagga attcagatgc agtgagggag gatgggagcc acagttcatt aggtcactac
     1021 ctgagagtgg tgcgaggtgc ccctcccagc tgattcctac accttcccag aattattgtc
     1081 agagatcgat tgggagggga tcccatgtga tgccagtcgg aaatccaggt actctgggag
     1141 tggccatttc cttcagtgag aatctgatgt ctcagggtgg cctgtcaagc ccagcttcct
     1201 gtggagtctc agtgatgacc cacagcaatg ccccaacaat gccttattct gtatccccaa
     1261 cagtacctgc caccacgggc tctttaaaac ctggaatatt tttggtccca ggcatgcctt
     1321 ccgctgagac ccatgctgtg accccctata tgaatcagat gttgcactcg gtaaatcctg
     1381 aaatggtctc agctaggttc cagcagttgc tacctataga ctcccaagat tcacttgcga
     1441 cccagtcaaa tgtccaggaa ggacctttca tgtgtgagca gcccacacct gctccacagg
     1501 agagagagac cgccagtact tcaagagggg caaccaggag acggtcccta gttttaaggc
     1561 cttacgtctg ctcatatgat gactgtggaa aagcttacac caagcgctct cacctcgtga
     1621 gtcacctacg caaacacaca ggtgagaagc cctacatatg tgactggaaa ggttgtaaat
     1681 ggaggttctt ccgctctgat gagcttggac gacataaacg gatccatacc agatatcgac
     1741 cacataaatg cgatgagtgt aaccgagagt tcatgagatc tgaccatctc aggcagcaca
     1801 agagaactca cctgcccaaa actgttggct tgcataccag cactaggaag cctggagaaa
     1861 catacacttt aaatcccatc ccatgggagg ccgaggcagg agctcagaac attcaagacc
     1921 agattgggct acagagtctg actttgttat aaacaaacaa gcaaacacac acacacacac
     1981 acacactatc tgaaatctac tgtcttaaat gaaaagtttg ccaaactagt actaggccaa
     2041 ttctgtttgg agaaaccagg gaatcggaag ttacctaggg gaagtgcatg gaatcccata
     2101 gta
//
